RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 SULT2B1O00204 365 aa19.51■□□□□ 0.71
HDDC3-203ENST00000494993 RAMP1O60894 148 aa19.51■□□□□ 0.71
HDDC3-203ENST00000494993 CD8AP01732 235 aa19.51■□□□□ 0.71
HDDC3-203ENST00000494993 CSNK2A1P68400 391 aaPredicted RBP19.51■□□□□ 0.71
HDDC3-203ENST00000494993 EIF3MQ7L2H7 374 aaKnown RBP19.51■□□□□ 0.71
HDDC3-203ENST00000494993 CXXC5Q7LFL8 322 aaKnown RBP19.51■□□□□ 0.71
HDDC3-203ENST00000494993 C16orf62Q7Z3J2 963 aa19.51■□□□□ 0.71
HDDC3-203ENST00000494993 DTX2Q86UW9 622 aa19.51■□□□□ 0.71
HDDC3-203ENST00000494993 ZNF100Q8IYN0 542 aa19.51■□□□□ 0.71
HDDC3-203ENST00000494993 SLC25A43Q8WUT9 341 aaPredicted RBP19.51■□□□□ 0.71
HDDC3-203ENST00000494993 GRIP2Q9C0E4 1043 aa19.51■□□□□ 0.71
HDDC3-203ENST00000494993 OR51I1Q9H343 314 aa19.51■□□□□ 0.71
HDDC3-203ENST00000494993 EXD2Q9NVH0 621 aa19.51■□□□□ 0.71
HDDC3-203ENST00000494993 NPAP1Q9NZP6 1156 aa19.51■□□□□ 0.71
HDDC3-203ENST00000494993 FBN1P35555 2871 aaKnown RBP19.51■□□□□ 0.71
HDDC3-203ENST00000494993 RNASET2O00584 256 aaKnown RBP19.5■□□□□ 0.71
HDDC3-203ENST00000494993 NDUFS7O75251 213 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 PGM3O95394 542 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 CREB1P16220 341 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 GGT1P19440 569 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 CDH11P55287 796 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 IFFO1Q0D2I5 559 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 MAPK14Q16539 360 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 SMU1Q2TAY7 513 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 DNM1P46Q6ZS02 220 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 P2RY8Q86VZ1 359 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 ZNF433Q8N7K0 673 aaPredicted RBP19.5■□□□□ 0.71
HDDC3-203ENST00000494993 OR4A15Q8NGL6 344 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 MIPOL1Q8TD10 442 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 HS6ST2Q96MM7 605 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 ZIM3Q96PE6 472 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 FAIMQ9NVQ4 179 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 EMC3Q9P0I2 261 aa19.5■□□□□ 0.71
HDDC3-203ENST00000494993 FBN3Q75N90 2809 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 IGKV3D-15A0A087WSY6 115 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 OR5H1A6NKK0 313 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 ABCD4O14678 606 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 KIAA0513O60268 411 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 TP53P04637 393 aaPredicted RBP19.49■□□□□ 0.71
HDDC3-203ENST00000494993 PGM1P36871 562 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 ETV4P43268 484 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 CASP9P55211 416 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 PDK3Q15120 406 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 MTDHQ86UE4 582 aaKnown RBP19.49■□□□□ 0.71
HDDC3-203ENST00000494993 FAM71CQ8NEG0 241 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 OR8J2Q8NGG1 315 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 OIT3Q8WWZ8 545 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 ROPN1BQ9BZX4 212 aaPredicted RBP19.49■□□□□ 0.71
HDDC3-203ENST00000494993 ROPN1Q9HAT0 212 aaPredicted RBP19.49■□□□□ 0.71
HDDC3-203ENST00000494993 BARX1Q9HBU1 254 aaPredicted RBP19.49■□□□□ 0.71
HDDC3-203ENST00000494993 GDF2Q9UK05 429 aaPredicted RBP19.49■□□□□ 0.71
HDDC3-203ENST00000494993 PCDHGB4Q9UN71 923 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 SLC35A3Q9Y2D2 325 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 WDR45Q9Y484 360 aa19.49■□□□□ 0.71
HDDC3-203ENST00000494993 SPIN1Q9Y657 262 aaPredicted RBP19.49■□□□□ 0.71
HDDC3-203ENST00000494993 GOLGA8QA0A0J9YX86 632 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 GOLGA8OA6NCC3 632 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 GOLGA8NF8WBI6 632 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 TYROBPO43914 113 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 ADAM11O75078 769 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 AGR2O95994 175 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 GUSBP08236 651 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 OR12D1P0DN82 309 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 TFPIP10646 304 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 APOBEC1P41238 236 aaKnown RBP19.48■□□□□ 0.71
HDDC3-203ENST00000494993 PDCD2Q16342 344 aaPredicted RBP19.48■□□□□ 0.71
HDDC3-203ENST00000494993 ATAD3BQ5T9A4 648 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 FBXW9Q5XUX1 488 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 TYW3Q6IPR3 259 aaKnown RBP19.48■□□□□ 0.71
HDDC3-203ENST00000494993 SPATA3Q8NHX4 192 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 ZNF563Q8TA94 476 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 ZHX1-C8orf76Q96EF9 292 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 CCDC106Q9BWC9 280 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 CTPS2Q9NRF8 586 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 POLE3Q9NRF9 147 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 CHRNA9Q9UGM1 479 aa19.48■□□□□ 0.71
HDDC3-203ENST00000494993 ZNF716A6NP11 495 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 ANKRD28O15084 1053 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 CD5LO43866 347 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 SCN2BO60939 215 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 BCAS1O75363 584 aaPredicted RBP19.47■□□□□ 0.71
HDDC3-203ENST00000494993 RAD51DO75771 328 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 IGHV3-9P01782 118 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 FUT5Q11128 374 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 TNFAIP8L2Q6P589 184 aaPredicted RBP19.47■□□□□ 0.71
HDDC3-203ENST00000494993 ANKRD46Q86W74 232 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 NUDCD3Q8IVD9 361 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 UBE2J2Q8N2K1 259 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 XAGE5Q8WWM1 108 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 RADILQ96JH8 1075 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 PPP1R36Q96LQ0 422 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 DPY30Q9C005 99 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 SAP130Q9H0E3 1048 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 AKTIPQ9H8T0 292 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 NOSIPQ9Y314 301 aaKnown RBP19.47■□□□□ 0.71
HDDC3-203ENST00000494993 MXRA5Q9NR99 2828 aa19.47■□□□□ 0.71
HDDC3-203ENST00000494993 ITM2AO43736 263 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 TLX2O43763 284 aaPredicted RBP19.46■□□□□ 0.71
HDDC3-203ENST00000494993 PMS2P2O95744 297 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 UQCRC2P22695 453 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms