RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 XRN1Q8IZH2 1706 aaKnown RBP3.67□□□□□ -1.82
GTF3A-208ENST00000493903 LRP5O75197 1615 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 LAMC1P11047 1609 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 NRXN3Q9Y4C0 1643 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 SCN5AQ14524 2016 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 SMCO3A2RU48 225 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 MEIOCA2RUB1 952 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ERICH4A6NGS2 130 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ACOD1A6NK06 481 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 OR2AG2A6NM03 316 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ARHGEF33A8MVX0 844 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 INSIG1O15503 277 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ZNF749O43361 778 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 DFNA5O60443 496 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 RAMP3O60896 148 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 AP2A1O95782 977 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 OTCP00480 354 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 FTH1P02794 183 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ALOX5P09917 674 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 HSD17B1P14061 328 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 TNNI1P19237 187 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 CD80P33681 288 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 FDFT1P37268 417 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 MAP3K8P41279 467 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 MFAP2P55001 183 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 CDH6P55285 790 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 DLX5P56178 289 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 PLP1P60201 277 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 RPL8P62917 257 aaKnown RBP3.67□□□□□ -1.82
GTF3A-208ENST00000493903 OC90Q02509 493 aaPredicted RBP3.67□□□□□ -1.82
GTF3A-208ENST00000493903 DOC2AQ14183 400 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 GK3PQ14409 553 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 WDR43Q15061 677 aaKnown RBP eCLIP3.67□□□□□ -1.82
GTF3A-208ENST00000493903 KLHL40Q2TBA0 621 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ACER2Q5QJU3 275 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ADAMTSL4-AS1Q5T5F5 129 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 PVRIGQ6DKI7 326 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 SCD5Q86SK9 330 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 TPRA1Q86W33 373 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 OFCC1Q8IZS5 231 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 LINC01561Q8N1V8 128 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ZNF321PQ8N8H1 164 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 OR2L3Q8NG85 312 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 OR7G2Q8NG99 324 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ZNF519Q8TB69 540 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 SCARB1Q8WTV0 552 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 UBE2E3Q969T4 207 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 NUS1Q96E22 293 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 IFT74Q96LB3 600 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 GSDMAQ96QA5 445 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 OR5B2Q96R09 309 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 SLC35A5Q9BS91 424 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 DNTTIP1Q9H147 329 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 GLT8D2Q9H1C3 349 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 LIME1Q9H400 295 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ANKRD19PQ9H560 264 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 IKZF5Q9H5V7 419 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 SUDS3Q9H7L9 328 aaPredicted RBP3.67□□□□□ -1.82
GTF3A-208ENST00000493903 GEMIN7Q9H840 131 aaKnown RBP3.67□□□□□ -1.82
GTF3A-208ENST00000493903 VCPKMTQ9H867 229 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ADGRL4Q9HBW9 690 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 ABCC13Q9NSE7 274 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 EHFQ9NZC4 300 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 GCNT4Q9P109 453 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 WRAP73Q9P2S5 460 aaPredicted RBP3.67□□□□□ -1.82
GTF3A-208ENST00000493903 PSMC3IPQ9P2W1 217 aaPredicted RBP3.67□□□□□ -1.82
GTF3A-208ENST00000493903 MGAT4AQ9UM21 535 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 SPATA2Q9UM82 520 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 GAB2Q9UQC2 676 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 TRAF3IP3Q9Y228 551 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 RIMS2Q9UQ26 1411 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 MYO5BQ9ULV0 1848 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 UNC13BO14795 1591 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 PHLPP2Q6ZVD8 1323 aa3.67□□□□□ -1.82
GTF3A-208ENST00000493903 RPRD2Q5VT52 1461 aaKnown RBP3.67□□□□□ -1.82
GTF3A-208ENST00000493903 WDR81Q562E7 1941 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 PIK3R4Q99570 1358 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 TRPM2O94759 1503 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 IGHV4-30-2A0A087WSY4 118 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 TRGV8A0A0C4DH27 118 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 TRBV11-1A0A0K0K1C0 115 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 K7EQG2 157 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 DIRAS1O95057 198 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 CLDN1O95832 211 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 HPP00738 406 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 S100A9P06702 114 aaKnown RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 WNT2P09544 360 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 H2AFZP0C0S5 128 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 PTBP1P26599 531 aaKnown RBP eCLIP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 GNA11P29992 359 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 YWHABP31946 246 aaKnown RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 CDH5P33151 784 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 CDKN1BP46527 198 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 STARP49675 285 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 RIDAP52758 137 aaKnown RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 TMEM50BP56557 158 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 CLDN8P56748 225 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 GSCP56915 257 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 FKBP3Q00688 224 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms