RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 EEFSECP57772 596 aaKnown RBP10.44□□□□□ -0.74
CTSA-209ENST00000493522 SESN3P58005 492 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 NCALDP61601 193 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 SLC25A3Q00325 362 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 DMTNQ08495 405 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 MERTKQ12866 999 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 EPS8Q12929 822 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 SELENBP1Q13228 472 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 ACSF3Q4G176 576 aaPredicted RBP10.44□□□□□ -0.74
CTSA-209ENST00000493522 LRRC23Q53EV4 343 aaPredicted RBP10.44□□□□□ -0.74
CTSA-209ENST00000493522 C16orf89Q6UX73 402 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 B3GNT6Q6ZMB0 384 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 TRPM8Q7Z2W7 1104 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 GRAMD2AQ8IUY3 354 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 PGAM4Q8N0Y7 254 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 CADM2Q8N3J6 435 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 RPRMLQ8N4K4 120 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 SMYD1Q8NB12 490 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 ATP6V1C2Q8NEY4 427 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 BHLHE22Q8NFJ8 381 aaPredicted RBP10.44□□□□□ -0.74
CTSA-209ENST00000493522 TAMM41Q96BW9 452 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 NSL1Q96IY1 281 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 KCTD14Q9BQ13 255 aaPredicted RBP10.44□□□□□ -0.74
CTSA-209ENST00000493522 PINK1Q9BXM7 581 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 ACER3Q9NUN7 267 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 KLHL28Q9NXS3 571 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 STOML1Q9UBI4 398 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 ABCD2Q9UBJ2 740 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 CHST2Q9Y4C5 530 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 FAM215AQ9Y5M1 114 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 AP4B1Q9Y6B7 739 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 E9PLN8 166 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 M0QX08 132 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 EIF1AYO14602 144 aaKnown RBP10.43□□□□□ -0.74
CTSA-209ENST00000493522 TPST1O60507 370 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 DNAJA2O60884 412 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 MFN2O95140 757 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 OPN1LWP04000 364 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 PRG2P13727 222 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 CPN1P15169 458 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 IL11P20809 199 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 CALB2P22676 271 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 ADH6P28332 368 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 CLDN20P56880 219 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 KRTAP10-9P60411 292 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 RPS3AP61247 264 aaKnown RBP10.43□□□□□ -0.74
CTSA-209ENST00000493522 COPZ1P61923 177 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 TLE4Q04727 773 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 VEZF1Q14119 521 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 SF3B4Q15427 424 aaKnown RBP eCLIP10.43□□□□□ -0.742e-6■■■■■ 34.8
CTSA-209ENST00000493522 CDSNQ15517 529 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 TESK1Q15569 626 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 GLIPR1L2Q4G1C9 344 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 SLC25A53Q5H9E4 307 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 RTL6Q6ICC9 239 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 PPP4R4Q6NUP7 873 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 C3orf33Q6P1S2 294 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 PLEKHM3Q6ZWE6 761 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 CHMP1BQ7LBR1 199 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 GRINAQ7Z429 371 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 GGNQ86UU5 652 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 COMTD1Q86VU5 262 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 RNF148Q8N7C7 305 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 CA5BP1Q8WTZ4 195 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 PHF10Q8WUB8 498 aaKnown RBP10.43□□□□□ -0.74
CTSA-209ENST00000493522 FIG4Q92562 907 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 ZNF524Q96C55 264 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 KLHL15Q96M94 604 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 TRIB1Q96RU8 372 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 DMRTA2Q96SC8 542 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 VKORC1Q9BQB6 163 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 TUBA1CQ9BQE3 449 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 MCCC2Q9HCC0 563 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 COQ3Q9NZJ6 369 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 PACSIN3Q9UKS6 424 aa10.43□□□□□ -0.74
CTSA-209ENST00000493522 GJE1A6NN92 205 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 CLCA1A8K7I4 914 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 AHRRA9YTQ3 701 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 B2RBV5 119 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 H0YC42 278 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 M0R3H8 397 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 FAAHO00519 579 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 CXCR6O00574 342 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 TNFSF11O14788 317 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 GCM2O75603 506 aaPredicted RBP10.42□□□□□ -0.74
CTSA-209ENST00000493522 UBOX5O94941 541 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 NTN1O95631 604 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 HOXD4P09016 255 aaPredicted RBP10.42□□□□□ -0.74
CTSA-209ENST00000493522 CCNA2P20248 432 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 CD247P20963 164 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 SHC1P29353 583 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 SLC7A1P30825 629 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 EIF1AXP47813 144 aaKnown RBP10.42□□□□□ -0.74
CTSA-209ENST00000493522 POLR2HP52434 150 aaKnown RBP10.42□□□□□ -0.74
CTSA-209ENST00000493522 SUCLG1P53597 346 aaKnown RBP10.42□□□□□ -0.74
CTSA-209ENST00000493522 TPD52P55327 224 aaPredicted RBP10.42□□□□□ -0.74
CTSA-209ENST00000493522 NUP107P57740 925 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 RAC1P63000 192 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 HOXC5Q00444 222 aa10.42□□□□□ -0.74
CTSA-209ENST00000493522 BCL2A1Q16548 175 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms