RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TMEM27Q9HBJ8 222 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 MCCC2Q9HCC0 563 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 EXOGQ9Y2C4 368 aaKnown RBP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 OR10H1Q9Y4A9 318 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 A0A087WV62 115 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 TRDV1A0A1B0GX56 115 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 CDC14CA4D256 554 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 FAM25AB3EWG3 89 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 FAM25CB3EWG5 89 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 FAM25GB3EWG6 89 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 OIP5O43482 229 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 SOX30O94993 753 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 HMGN1P05114 100 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 GSTT2P0CG29 244 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 GSTT2BP0CG30 244 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 PYCR1P32322 319 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 MAP3K8P41279 467 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 SNAP47Q5SQN1 464 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 KIAA0895LQ68EN5 471 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 MTFR2Q6P444 385 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 POMZP3Q6PJE2 187 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 CD200R1LQ6Q8B3 271 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 TMEM151BQ8IW70 566 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 Q8N402 240 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 LNX2Q8N448 690 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 OR5M3Q8NGP4 307 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 C16orf52Q8NHV5 167 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 LMX1AQ8TE12 382 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF524Q96C55 264 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 NECTIN4Q96NY8 510 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 FYTTD1Q96QD9 318 aaKnown RBP11.46□□□□□ -0.57
HMGN1-220ENST00000492280 TTYH2Q9BSA4 534 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 NUFIP1Q9UHK0 495 aaKnown RBP11.46□□□□□ -0.57
HMGN1-220ENST00000492280 SATB2Q9UPW6 733 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 TRAPPC4Q9Y296 219 aa11.46□□□□□ -0.57
HMGN1-220ENST00000492280 IDSB3KWA1 339 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 J3QRE1 110 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 NKX2-2O95096 273 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 TFP02787 698 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 HLA-DPB1P04440 258 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 HIST1H1CP16403 213 aaKnown RBP11.46□□□□□ -0.58
HMGN1-220ENST00000492280 KIR2DL3P43628 341 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 EXOSC6Q5RKV6 272 aaKnown RBP11.46□□□□□ -0.58
HMGN1-220ENST00000492280 FAM98AQ8NCA5 519 aaKnown RBP11.46□□□□□ -0.58
HMGN1-220ENST00000492280 RASD2Q96D21 266 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 STACQ99469 402 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 NRSN2Q9GZP1 204 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 HOXD1Q9GZZ0 328 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 ADGRL4Q9HBW9 690 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 CMC2Q9NRP2 79 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 CA14Q9ULX7 337 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 CLDN16Q9Y5I7 305 aa11.46□□□□□ -0.58
HMGN1-220ENST00000492280 A0A0G2JMP0 313 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 A0A0X1KG70 313 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 A0A1B0GVT2 93 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 MEIOCA2RUB1 952 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 ZNF85Q03923 595 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 SCN1BQ07699 218 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 FHL1Q13642 323 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 SLC25A35Q3KQZ1 300 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 FAAH2Q6GMR7 532 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 ESPNLQ6ZVH7 1005 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 UBQLNLQ8IYU4 475 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 OR4M2Q8NGB6 313 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 OR5W2Q8NH69 310 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 DNAJA4Q8WW22 397 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-220ENST00000492280 SMPDL3BQ92485 455 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 TMEM131Q92545 1883 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 NR4A3Q92570 626 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 ITFG2Q969R8 447 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 KLHDC7BQ96G42 594 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 VSTM2LQ96N03 204 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 SPRTNQ9H040 489 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-220ENST00000492280 SEMA6CQ9H3T2 930 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 KRCC1Q9NPI7 259 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-220ENST00000492280 ENTPD2Q9Y5L3 495 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 IER3IP1Q9Y5U9 82 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 IGHV5-51A0A0C4DH38 117 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 KIR2DS5A0A0G2JLQ3 304 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 A0A0G2JNG1 304 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 FAM86C2PA6NEL3 165 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 RIIAD1A6NNX1 92 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 KIR2DS3K7RE56 304 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 CHP2O43745 196 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 SLC35E2P0CK97 266 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 PSKH1P11801 424 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 ELK1P19419 428 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 FGF9P31371 208 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-220ENST00000492280 PSMB10P40306 273 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 OR1D4P47884 311 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 KIR2DS5Q14953 304 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 TBRG1Q3YBR2 411 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 CBLN3Q6UW01 205 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 RAB43Q86YS6 212 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 CDK20Q8IZL9 346 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 OR6F1Q8NGZ6 308 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 OR4C6Q8NH72 309 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 TSSK2Q96PF2 358 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 NMNAT3Q96T66 252 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 GDF15Q99988 308 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms