RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	HPCAL1	P37235	193 aa		13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	NR4A2	P43354	598 aa		13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	PHC1	P78364	1004 aa		13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	TP53BP2	Q13625	1128 aa		13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	SYT14P1	Q58G82	188 aa		13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	CLEC6A	Q6EIG7	209 aa		13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	RNF165	Q6ZSG1	346 aa		13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	MTDH	Q86UE4	582 aa	Known RBP	13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	OR2T11	Q8NH01	316 aa		13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	PSMA8	Q8TAA3	256 aa		13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	ZHX1-C8orf76	Q96EF9	292 aa		13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	MUS81	Q96NY9	551 aa		13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	EML4	Q9HC35	981 aa	Known RBP	13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	NUP214	P35658	2090 aa	Predicted RBP	13.39	□□□□□ -0.27
AGAP3-222	ENST00000490839	ZNF716	A6NP11	495 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	GLRA3	O75311	464 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	APEH	P13798	732 aa	Known RBP	13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	APOBEC3A	P31941	199 aa	Predicted RBP	13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	RPL3	P39023	403 aa	Known RBP	13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	CCT3	P49368	545 aa	Known RBP	13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	SKP2	Q13309	424 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	GABRA6	Q16445	453 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	RFTN2	Q52LD8	501 aa	Predicted RBP	13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	C1QTNF12	Q5T7M4	302 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	C17orf78	Q8N4C9	275 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	PIGX	Q8TBF5	258 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	TMEM234	Q8WY98	164 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	TRMO	Q9BU70	441 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	PRR14	Q9BWN1	585 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	NMUR2	Q9GZQ4	415 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	LAT2	Q9GZY6	243 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	GPATCH2	Q9NW75	528 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	ATP6V1H	Q9UI12	483 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	AMDHD2	Q9Y303	409 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	TRAF6	Q9Y4K3	522 aa		13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	SPIN1	Q9Y657	262 aa	Predicted RBP	13.38	□□□□□ -0.27
AGAP3-222	ENST00000490839	SERINC4	A6NH21	518 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	AZIN1	O14977	448 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	LSM1	O15116	133 aa	Known RBP	13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	SCAMP2	O15127	329 aa	Known RBP	13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	DNPH1	O43598	174 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	CHEK2	O96017	543 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	PROC	P04070	461 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	ITGA5	P08648	1049 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	BCKDHA	P12694	445 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	SLC16A1	P53985	500 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	SESN3	P58005	492 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	MERTK	Q12866	999 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	PDZK1	Q5T2W1	519 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	SFXN5	Q8TD22	340 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	MZB1	Q8WU39	189 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	OR5P2	Q8WZ92	322 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	THUMPD3	Q9BV44	507 aa	Known RBP	13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	C1QTNF6	Q9BXI9	259 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	ACER3	Q9NUN7	267 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	OXSM	Q9NWU1	459 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	DCTN4	Q9UJW0	460 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	KCNE3	Q9Y6H6	103 aa		13.37	□□□□□ -0.27
AGAP3-222	ENST00000490839	IGHV4-61	A0A0C4DH41	118 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	TMEM114	B3SHH9	223 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	ATP6V1G2-DDX39B	F2Z307	99 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	PDLIM1	O00151	329 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	KIAA0513	O60268	411 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	MRPL33	O75394	65 aa	Known RBP	13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	CYP7B1	O75881	506 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	PMS2P2	O95744	297 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	PGC	P20142	388 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	SNRPD2	P62316	118 aa	Known RBP	13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	SWI5	Q1ZZU3	235 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	CCDC153	Q494R4	210 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	SPDYE7P	Q495Y7	208 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	GALNTL6	Q49A17	601 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	LIPM	Q5VYY2	423 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	RFLNB	Q8N5W9	214 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	NATD1	Q8N6N6	113 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	WDR31	Q8NA23	367 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	OR7A2P	Q8NGA2	310 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	C3orf49	Q96BT1	292 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	MOAP1	Q96BY2	351 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	SORCS2	Q96PQ0	1159 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	OR7D2	Q96RA2	312 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	TUBB1	Q9H4B7	451 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	SLC17A5	Q9NRA2	495 aa		13.36	□□□□□ -0.27
AGAP3-222	ENST00000490839	LOC390937	A0A1W2PQ73	354 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	TCF21	O43680	179 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	PLIN3	O60664	434 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	CSTA	P01040	98 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	TGFA	P01135	160 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	LINC00032	P0C843	101 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	TFPI	P10646	304 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	LAMP1	P11279	417 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	ZNF23	P17027	643 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	MAPK1	P28482	360 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	NTF4	P34130	210 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	APOBEC1	P41238	236 aa	Known RBP	13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	FOXG1	P55316	489 aa	Predicted RBP	13.35	□□□□□ -0.27

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