RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	WDR55	Q9H6Y2	383 aa	Predicted RBP	2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	VIPAS39	Q9H9C1	493 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	FKRP	Q9H9S5	495 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	UGT1A10	Q9HAW8	530 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	LPAR2	Q9HBW0	351 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	RAVER2	Q9HCJ3	691 aa	Known RBP	2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	POLD4	Q9HCU8	107 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	ZC4H2	Q9NQZ6	224 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	NANS	Q9NR45	359 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	GKN1	Q9NS71	199 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	C1orf123	Q9NWV4	160 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	NDE1	Q9NXR1	346 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	MRPL39	Q9NYK5	338 aa	Known RBP	2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	MIS18A	Q9NYP9	233 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	USE1	Q9NZ43	259 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	CD274	Q9NZQ7	290 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	MYEF2	Q9P2K5	600 aa	Known RBP	2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	GNG12	Q9UBI6	72 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	POLK	Q9UBT6	870 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	APOBEC3B	Q9UH17	382 aa	Known RBP	2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	CLEC2D	Q9UHP7	191 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	EMCN	Q9ULC0	261 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	PRPF19	Q9UMS4	504 aa	Known RBP	2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	WDR83OS	Q9Y284	106 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	MEMO1	Q9Y316	297 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	NSG2	Q9Y328	171 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	RNF115	Q9Y4L5	304 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	YIPF1	Q9Y548	306 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	FHAD1	B1AJZ9	1412 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	FHOD3	Q2V2M9	1422 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	ATP10D	Q9P241	1426 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	SMARCA2	P51531	1590 aa		2.23	□□□□□ -2.05
PUM3-204	ENST00000490444	AFF2	P51816	1311 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	UMODL1	Q5DID0	1318 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CDHR2	Q9BYE9	1310 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	KBTBD11-OT1	A0A1B0GTJ5	212 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444		A0A1W2PPI3	338 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	BCLAF3	A2AJT9	711 aa	Known RBP	2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	HYKK	A2RU49	373 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CASTOR2	A6NHX0	329 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	ARGFX	A6NJG6	315 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CENPX	A8MT69	81 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	C17orf105	B2RV13	164 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444		E5RI56	91 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444		E7EWF7	191 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	RNASEK-C17orf49	H0YIS7	233 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	KLRC4-KLRK1	H3BQV0	150 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444		H3BTX0	84 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444		M0R3G1	203 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	ARPC1B	O15143	372 aa	Known RBP	2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	XRCC2	O43543	280 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	GATC	O43716	136 aa	Known RBP	2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	AIRE	O43918	545 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	PRKN	O60260	465 aa	Predicted RBP	2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	ENTPD5	O75356	428 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	HSBP1	O75506	76 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	GPX5	O75715	221 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CIAO1	O76071	339 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	DEXI	O95424	95 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CLDN9	O95484	217 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	ASS1	P00966	412 aa	Known RBP	2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	EPO	P01588	193 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	SERPINB2	P05120	415 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	TFAP2A	P05549	437 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	FABP1	P07148	127 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CD3G	P09693	182 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CTXN2	P0C2S0	81 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	PET100	P0DJ07	73 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	PSKH1	P11801	424 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	PAX1	P15863	534 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	RAB4A	P20338	218 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	G0S2	P27469	103 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	GABRR2	P28476	465 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CD1C	P29017	333 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	GJB2	P29033	226 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	EPHX2	P34913	555 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CFHR2	P36980	270 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	AQP2	P41181	271 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	MAGEA2	P43356	314 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	HTR5A	P47898	357 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	TAF6	P49848	677 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	GNG10	P50151	68 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	DUSP3	P51452	185 aa	Predicted RBP	2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CCR8	P51685	355 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	UCN	P55089	124 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CLDN15	P56746	228 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	MAGOH	P61326	146 aa	Known RBP	2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	ATP6V0D1	P61421	351 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	ADARB1	P78563	741 aa	Known RBP	2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	PITPNA	Q00169	270 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	MAT1A	Q00266	395 aa	Known RBP	2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	SP3	Q02447	781 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	SRY	Q05066	204 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	KIR2DS3	Q14952	304 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	SPHAR	Q15513	63 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	CHI3L2	Q15782	390 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	EXOC3L4	Q17RC7	722 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	ZSWIM7	Q19AV6	140 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	GGTA1P	Q4G0N0	100 aa		2.22	□□□□□ -2.05
PUM3-204	ENST00000490444	SFT2D3	Q587I9	215 aa		2.22	□□□□□ -2.05

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms