RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SERINC1Q9NRX5 453 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 FAIMQ9NVQ4 179 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 ASIC5Q9NY37 505 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 NOP53Q9NZM5 478 aaKnown RBP16.28■□□□□ 0.2
HDAC6-231ENST00000488905 MKLN1Q9UL63 735 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 SULT2B1O00204 365 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 ABCD4O14678 606 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 KIAA0513O60268 411 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 FCMRO60667 390 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 ADAM11O75078 769 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 NDUFS7O75251 213 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 CD8AP01732 235 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 TP53P04637 393 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-231ENST00000488905 NUDT17P0C025 328 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 GGT1P19440 569 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 PGCP20142 388 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 CLDN8P56748 225 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 ARHGAP11BQ3KRB8 267 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 OR4F3Q6IEY1 312 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 TMPPEQ6ZT21 453 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 EIF3MQ7L2H7 374 aaKnown RBP16.27■□□□□ 0.2
HDAC6-231ENST00000488905 C16orf62Q7Z3J2 963 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 P2RY8Q86VZ1 359 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 ZNF100Q8IYN0 542 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 FAM71CQ8NEG0 241 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 SPATA3Q8NHX4 192 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 GRIP2Q9C0E4 1043 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 BARX1Q9HBU1 254 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-231ENST00000488905 ACER3Q9NUN7 267 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 CISD1Q9NZ45 108 aaKnown RBP16.27■□□□□ 0.2
HDAC6-231ENST00000488905 EMC3Q9P0I2 261 aa16.27■□□□□ 0.2
HDAC6-231ENST00000488905 GDF2Q9UK05 429 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-231ENST00000488905 SVEP1Q4LDE5 3571 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 IGKV3D-15A0A087WSY6 115 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 GOLGA8QA0A0J9YX86 632 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 GOLGA8OA6NCC3 632 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 OR5H1A6NKK0 313 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 GOLGA8NF8WBI6 632 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 RNASET2O00584 256 aaKnown RBP16.26■□□□□ 0.19
HDAC6-231ENST00000488905 PGM3O95394 542 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 EMX2Q04743 252 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 ZNF433Q8N7K0 673 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-231ENST00000488905 OR4A15Q8NGL6 344 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 MIPOL1Q8TD10 442 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 OR51I1Q9H343 314 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 EXD2Q9NVH0 621 aa16.26■□□□□ 0.19
HDAC6-231ENST00000488905 SPIN1Q9Y657 262 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-231ENST00000488905 CD5LO43866 347 aa16.25■□□□□ 0.19
HDAC6-231ENST00000488905 RAD51DO75771 328 aa16.25■□□□□ 0.19
HDAC6-231ENST00000488905 BPGMP07738 259 aa16.25■□□□□ 0.19
HDAC6-231ENST00000488905 PGM1P36871 562 aa16.25■□□□□ 0.19
HDAC6-231ENST00000488905 IFFO1Q0D2I5 559 aa16.25■□□□□ 0.19
HDAC6-231ENST00000488905 PDK3Q15120 406 aa16.25■□□□□ 0.19
HDAC6-231ENST00000488905 MAPK14Q16539 360 aa16.25■□□□□ 0.19
HDAC6-231ENST00000488905 MTDHQ86UE4 582 aaKnown RBP16.25■□□□□ 0.19
HDAC6-231ENST00000488905 OIT3Q8WWZ8 545 aa16.25■□□□□ 0.19
HDAC6-231ENST00000488905 CHRNA9Q9UGM1 479 aa16.25■□□□□ 0.19
HDAC6-231ENST00000488905 SLC35A3Q9Y2D2 325 aa16.25■□□□□ 0.19
HDAC6-231ENST00000488905 ZNF716A6NP11 495 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 TLX2O43763 284 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-231ENST00000488905 BCAS1O75363 584 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-231ENST00000488905 AGR2O95994 175 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 IGHV3-9P01782 118 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 TFPIP10646 304 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 CREB1P16220 341 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 APOBEC1P41238 236 aaKnown RBP16.24■□□□□ 0.19
HDAC6-231ENST00000488905 CASP9P55211 416 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 FUT5Q11128 374 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 PDCD2Q16342 344 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-231ENST00000488905 NRF1Q16656 503 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 SMU1Q2TAY7 513 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 ATAD3BQ5T9A4 648 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 AGAP6Q5VW22 663 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 FBXW9Q5XUX1 488 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 TYW3Q6IPR3 259 aaKnown RBP16.24■□□□□ 0.19
HDAC6-231ENST00000488905 UBE2J2Q8N2K1 259 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 OR8J2Q8NGG1 315 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 APH1AQ96BI3 265 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 ZHX1-C8orf76Q96EF9 292 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 RADILQ96JH8 1075 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 ZIM3Q96PE6 472 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 CCDC106Q9BWC9 280 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 CTPS2Q9NRF8 586 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 POLE3Q9NRF9 147 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 NOSIPQ9Y314 301 aaKnown RBP16.24■□□□□ 0.19
HDAC6-231ENST00000488905 WDR45Q9Y484 360 aa16.24■□□□□ 0.19
HDAC6-231ENST00000488905 ARFGEF3Q5TH69 2177 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 ANKRD28O15084 1053 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 TYROBPO43914 113 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 PMS2P2O95744 297 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 GUSBP08236 651 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 OR12D1P0DN82 309 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 ETV4P43268 484 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 SPOCK1Q08629 439 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 TNFAIP8L2Q6P589 184 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-231ENST00000488905 EMBQ6PCB8 327 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 TMEM108Q6UXF1 575 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 FRRS1Q6ZNA5 592 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 GRINAQ7Z429 371 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 ANKRD46Q86W74 232 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms