RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 ZSCAN25Q6NSZ9 544 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 FAM199XQ6PEV8 388 aaPredicted RBP1.41□□□□□ -2.18
SMC4-220ENST00000488017 RNF165Q6ZSG1 346 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 ARMCX2Q7L311 632 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 FAM220AQ7Z4H9 259 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 ZNF429Q86V71 674 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 SAXO1Q8IYX7 474 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 PAQR8Q8TEZ7 354 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 AKR1E2Q96JD6 320 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 FOPNLQ96NB1 174 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 OR5B2Q96R09 309 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 CDX2Q99626 313 aaPredicted RBP1.41□□□□□ -2.18
SMC4-220ENST00000488017 ARHGDIGQ99819 225 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 POLD4Q9HCU8 107 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 WRAP73Q9P2S5 460 aaPredicted RBP1.41□□□□□ -2.18
SMC4-220ENST00000488017 BTNL2Q9UIR0 455 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 PRPF19Q9UMS4 504 aaKnown RBP1.41□□□□□ -2.18
SMC4-220ENST00000488017 CHMP2BQ9UQN3 213 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 MFHAS1Q9Y4C4 1052 aa1.41□□□□□ -2.18
SMC4-220ENST00000488017 ATP10DQ9P241 1426 aa1.4□□□□□ -2.18
SMC4-220ENST00000488017 FRMPD3Q5JV73 1810 aa1.4□□□□□ -2.18
SMC4-220ENST00000488017 IGLV4-69A0A075B6H9 119 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 A0A087WZY1 265 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 RGSL1A5PLK6 1076 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 A6NDX4 124 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 PP2D1A8MPX8 630 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 A8MUA0 341 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 KIF2AO00139 706 aaPredicted RBP1.4□□□□□ -2.19
SMC4-220ENST00000488017 SULT2B1O00204 365 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 MED6O75586 246 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 NEBLO76041 1014 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 SNAPINO95295 136 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 TRIM16O95361 564 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 AK1P00568 194 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 CA1P00915 261 aaPredicted RBP1.4□□□□□ -2.19
SMC4-220ENST00000488017 NCF1P14598 390 aaPredicted RBP1.4□□□□□ -2.19
SMC4-220ENST00000488017 RCC1P18754 421 aaPredicted RBP1.4□□□□□ -2.19
SMC4-220ENST00000488017 TNNI3P19429 210 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 CCNCP24863 283 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 NMT1P30419 496 aaKnown RBP1.4□□□□□ -2.19
SMC4-220ENST00000488017 KIF5BP33176 963 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 CD86P42081 329 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 NSDHLQ15738 373 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 SLC5A12Q1EHB4 618 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 TSPO2Q5TGU0 170 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 C12orf60Q5U649 245 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 LRRC8BQ6P9F7 803 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 APTXQ7Z2E3 356 aaKnown RBP1.4□□□□□ -2.19
SMC4-220ENST00000488017 DPY19L4Q7Z388 723 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 TMEM17Q86X19 198 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 Q8N9W7 124 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 OR51G2Q8NGK0 314 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 AENQ8WTP8 325 aaKnown RBP1.4□□□□□ -2.19
SMC4-220ENST00000488017 UBE2Q2Q8WVN8 375 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 UCN3Q969E3 161 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 C4orf36Q96KX1 117 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 MCHR1Q99705 422 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 SLC6A7Q99884 636 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 CITED1Q99966 193 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 SLC30A2Q9BRI3 323 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 SRXN1Q9BYN0 137 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 CRNKL1Q9BZJ0 848 aaKnown RBP1.4□□□□□ -2.19
SMC4-220ENST00000488017 MEAF6Q9HAF1 191 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 TAS2R3Q9NYW6 316 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 CHRNA9Q9UGM1 479 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 OARD1Q9Y530 152 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 SPACA6W5XKT8 324 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 MTCL1Q9Y4B5 1905 aaKnown RBP1.4□□□□□ -2.19
SMC4-220ENST00000488017 ITGB4P16144 1822 aa1.4□□□□□ -2.19
SMC4-220ENST00000488017 A0A0G2JRQ6 117 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 A0A1B0GWB2 263 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 TMEM150BA6NC51 233 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 GJE1A6NN92 205 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 CTAGE5O15320 804 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 OR1F1O43749 312 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 TM7SF2O76062 418 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 KLF8O95600 359 aaPredicted RBP1.39□□□□□ -2.19
SMC4-220ENST00000488017 IFNB1P01574 187 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 ADRB3P13945 408 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 MAGP20916 626 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 CALB2P22676 271 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 ZNF136P52737 540 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 HSPA2P54652 639 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 HTD2P86397 168 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 CNTN2Q02246 1040 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 SCGB2A2Q13296 93 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 USH1GQ495M9 461 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 LIPNQ5VXI9 398 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 ATL3Q6DD88 541 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 FAHD2BQ6P2I3 314 aaPredicted RBP1.39□□□□□ -2.19
SMC4-220ENST00000488017 UNQ9370/PRO34162Q6UXP9 181 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 ZFP2Q6ZN57 461 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 ARCQ7LC44 396 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 KIAA1328Q86T90 577 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 NRMQ8IXM6 262 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 DENND6BQ8NEG7 585 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 OR52I1Q8NGK6 324 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 OR5L2Q8NGL0 311 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 SLC5A11Q8WWX8 675 aa1.39□□□□□ -2.19
SMC4-220ENST00000488017 RPL3LQ92901 407 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms