RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 CFAP73A6NFT4 308 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 CXCR6O00574 342 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 ACOT8O14734 319 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 BCKDKO14874 412 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 TFECO14948 347 aaPredicted RBP8.04□□□□□ -1.12
DDX56-211ENST00000479602 GYG2O15488 501 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 ZNF208O43345 1280 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 HCRTR2O43614 444 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 BCAS1O75363 584 aaPredicted RBP8.04□□□□□ -1.12
DDX56-211ENST00000479602 EPPINO95925 133 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 SEMG1P04279 462 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 FESP07332 822 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 CPN1P15169 458 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 GCKP35557 465 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 APOBEC1P41238 236 aaKnown RBP8.04□□□□□ -1.12
DDX56-211ENST00000479602 ACAA2P42765 397 aaKnown RBP8.04□□□□□ -1.12
DDX56-211ENST00000479602 SLC1A3P43003 542 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 MASP1P48740 699 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 ZNF136P52737 540 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 NUP107P57740 925 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 B3GALT5-AS1P59052 145 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 NCALDP61601 193 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 PPIAP62937 165 aaKnown RBP8.04□□□□□ -1.12
DDX56-211ENST00000479602 SLC25A3Q00325 362 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 DMTNQ08495 405 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 SLC10A1Q14973 349 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 SF3B4Q15427 424 aaKnown RBP eCLIP8.04□□□□□ -1.121e-8■□□□□ 10.3
DDX56-211ENST00000479602 ZNF311Q5JNZ3 666 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 BICRALQ6AI39 1079 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 VASNQ6EMK4 673 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 AAGABQ6PD74 315 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 POMZP3Q6PJE2 187 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 PIWIL3Q7Z3Z3 882 aaKnown RBP8.04□□□□□ -1.12
DDX56-211ENST00000479602 GRINAQ7Z429 371 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 MARCH3Q86UD3 253 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 LIX1LQ8IVB5 337 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 OR4K17Q8NGC6 315 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 PHOSPHO1Q8TCT1 267 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 GPR119Q8TDV5 335 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 DUSP19Q8WTR2 217 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 DNAJA4Q8WW22 397 aaPredicted RBP8.04□□□□□ -1.12
DDX56-211ENST00000479602 ZG16BQ96DA0 208 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 OTUB1Q96FW1 271 aaPredicted RBP8.04□□□□□ -1.12
DDX56-211ENST00000479602 DUS3LQ96G46 650 aaKnown RBP8.04□□□□□ -1.12
DDX56-211ENST00000479602 CDRT15Q96T59 188 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 TTYH2Q9BSA4 534 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 TMUB1Q9BVT8 246 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 RSPO3Q9BXY4 272 aaPredicted RBP8.04□□□□□ -1.12
DDX56-211ENST00000479602 SLC19A3Q9BZV2 496 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 TRIM2Q9C040 744 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 ADAM19Q9H013 955 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 DEFB127Q9H1M4 99 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 MAGIXQ9H6Y5 334 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 MED17Q9NVC6 651 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 ADPRHL2Q9NX46 363 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 COQ3Q9NZJ6 369 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 KCNN3Q9UGI6 736 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 AP4B1Q9Y6B7 739 aa8.04□□□□□ -1.12
DDX56-211ENST00000479602 NSD1Q96L73 2696 aaPredicted RBP8.03□□□□□ -1.12
DDX56-211ENST00000479602 MPDZO75970 2070 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 NKX2-6A6NCS4 301 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 M0QX08 132 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 ARPC2O15144 300 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 ADAMDEC1O15204 470 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 GSC2O15499 205 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 SCO2O43819 266 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 ZIC3O60481 467 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 ADAM11O75078 769 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 NPIPB7O75200 414 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 TPOP07202 933 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 RFPL3SP0C7P2 107 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 GLI4P10075 376 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 UMPSP11172 480 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 PRKCAP17252 672 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 DPP4P27487 766 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 CPA2P48052 419 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 ZNF41P51814 821 aaPredicted RBP8.03□□□□□ -1.12
DDX56-211ENST00000479602 GPR85P60893 370 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 CRYZQ08257 329 aaKnown RBP8.03□□□□□ -1.12
DDX56-211ENST00000479602 PMPCAQ10713 525 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 MERTKQ12866 999 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 SELENBP1Q13228 472 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 ZNF239Q16600 458 aaKnown RBP8.03□□□□□ -1.12
DDX56-211ENST00000479602 DUSP7Q16829 419 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 CYBRD1Q53TN4 286 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 DESI1Q6ICB0 168 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 WBP2NLQ6ICG8 309 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 C3orf33Q6P1S2 294 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 CBLN3Q6UW01 205 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 ENPP6Q6UWR7 440 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 RINLQ6ZS11 566 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 CCDC121Q6ZUS5 278 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 SEM1Q6ZVN7 128 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 CDH24Q86UP0 819 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 IFNEQ86WN2 208 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 CCDC71Q8IV32 467 aaPredicted RBP8.03□□□□□ -1.12
DDX56-211ENST00000479602 PM20D2Q8IYS1 436 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 FAM83FQ8NEG4 500 aaPredicted RBP8.03□□□□□ -1.12
DDX56-211ENST00000479602 GPR32P1Q8NGA4 272 aa8.03□□□□□ -1.12
DDX56-211ENST00000479602 GEMIN6Q8WXD5 167 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms