RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PPP1R36Q96LQ0 422 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 ZBTB18Q99592 522 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 KLHDC3Q9BQ90 382 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 EXOSC3Q9NQT5 275 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 MARCOQ9UEW3 520 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 CHRNA9Q9UGM1 479 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 LIPT1Q9Y234 373 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 HDGFL3Q9Y3E1 203 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 IGHV3-15A0A0B4J1V0 119 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 WDR91A4D1P6 747 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 FCMRO60667 390 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 CPSF4O95639 269 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 PLAUP00749 431 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 S100A3P33764 101 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 IDUAP35475 653 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 SLC1A6P48664 564 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 MAP2K6P52564 334 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 VEZF1Q14119 521 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 ZNF672Q499Z4 452 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 GPAT3Q53EU6 434 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 ABLIM2Q6H8Q1 611 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 TNFAIP8L2Q6P589 184 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 KLHL17Q6TDP4 642 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 MTDHQ86UE4 582 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 UBE2J2Q8N2K1 259 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 PIWIL2Q8TC59 973 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 SMAP2Q8WU79 429 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 PMM1Q92871 262 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 APH1AQ96BI3 265 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 ROPN1LQ96C74 230 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 NEURL3Q96EH8 262 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 SLC35A5Q9BS91 424 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 CENPHQ9H3R5 247 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 CACYBPQ9HB71 228 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 PRDM4Q9UKN5 801 aa12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 NSD1Q96L73 2696 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-209ENST00000478349 ESPNB1AK53 854 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 EIF1BO60739 113 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 LYZL6O75951 148 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 H6PDO95479 791 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 PMS2P2O95744 297 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 TP53P04637 393 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 OR12D1P0DN82 309 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 COX5AP20674 150 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 PGM1P36871 562 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 MAGEA8P43361 318 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 BSPH1Q075Z2 132 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 STX3Q13277 289 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 CLEC12BQ2HXU8 276 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 C1QTNF12Q5T7M4 302 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 SAXO2Q658L1 398 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 OGFOD2Q6N063 350 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 TMEM108Q6UXF1 575 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 DNAJC14Q6Y2X3 702 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 ANKRD46Q86W74 232 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 DEPDC4Q8N2C3 294 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 CIARTQ8N365 385 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 FAM71CQ8NEG0 241 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 RAB3IL1Q8TBN0 382 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 DDIT4LQ96D03 193 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 HS6ST2Q96MM7 605 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 TRNT1Q96Q11 434 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 SAP130Q9H0E3 1048 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 QRSL1Q9H0R6 528 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 SERHL2Q9H4I8 314 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 BTNL2Q9UIR0 455 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 HAO1Q9UJM8 370 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 MGAT4BQ9UQ53 548 aa12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 NOSIPQ9Y314 301 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-209ENST00000478349 IGKV3D-15A0A087WSY6 115 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 CIB4A0PJX0 185 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 OR5H1A6NKK0 313 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 TRPC5OSA6NMA1 111 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 ZNF814B7Z6K7 855 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 ITM2AO43736 263 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 CREB1P16220 341 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 PCSK6P29122 969 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 RYKP34925 604 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 CDH11P55287 796 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 KCNJ10P78508 379 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 CASP8Q14790 479 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 TSC22D1Q15714 1073 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 NRF1Q16656 503 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 FAM174BQ3ZCQ3 159 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 SPANXN4Q5MJ08 99 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 FBXW9Q5XUX1 488 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 OR7E24Q6IFN5 339 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 TYW3Q6IPR3 259 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 SPATA19Q7Z5L4 167 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 ZNF440Q8IYI8 595 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 CCDC115Q96NT0 180 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 PANX1Q96RD7 426 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 ZNF300Q96RE9 604 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 CCDC106Q9BWC9 280 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 NUF2Q9BZD4 464 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 GRIP2Q9C0E4 1043 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 MEAF6Q9HAF1 191 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 KCNK9Q9NPC2 374 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 PARPBPQ9NWS1 579 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms