RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 PRSS23O95084 383 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 IFNW1P05000 195 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 APOBEC1P41238 236 aaKnown RBP17.99■□□□□ 0.47
ACTB-210ENST00000477812 HTR3AP46098 478 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 POLR2HP52434 150 aaKnown RBP17.99■□□□□ 0.47
ACTB-210ENST00000477812 CLDN18P56856 261 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 VLDLRP98155 873 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 ZNF613Q6PF04 617 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 GFRALQ6UXV0 394 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 PRICKLE2Q7Z3G6 844 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 GGNQ86UU5 652 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 ADGRG5Q8IZF4 528 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 ADAMTS16Q8TE57 1224 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 ABTB1Q969K4 478 aaPredicted RBP17.99■□□□□ 0.47
ACTB-210ENST00000477812 EXO5Q9H790 373 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 NDUFAF4Q9P032 175 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 A4GNTQ9UNA3 340 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 ZNF835Q9Y2P0 537 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 AP4B1Q9Y6B7 739 aa17.99■□□□□ 0.47
ACTB-210ENST00000477812 RP1L1Q8IWN7 2480 aaPredicted RBP17.98■□□□□ 0.47
ACTB-210ENST00000477812 CPSF4LA6NMK7 179 aaKnown RBP17.98■□□□□ 0.47
ACTB-210ENST00000477812 FFAR1O14842 300 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 ZNF708P17019 499 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 SHC1P29353 583 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 STARP49675 285 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 CDH12P55289 794 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 CLDN15P56746 228 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 RAC1P63000 192 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 SELENBP1Q13228 472 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 BCL2A1Q16548 175 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 SWT1Q5T5J6 900 aaKnown RBP17.98■□□□□ 0.47
ACTB-210ENST00000477812 DEF8Q6ZN54 512 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 POP5Q969H6 163 aaKnown RBP17.98■□□□□ 0.47
ACTB-210ENST00000477812 WDYHV1Q96HA8 205 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 LRGUKQ96M69 825 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 POLR2J2Q9GZM3 115 aaKnown RBP17.98■□□□□ 0.47
ACTB-210ENST00000477812 PRDM14Q9GZV8 571 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 POLR2J3Q9H1A7 115 aaKnown RBP17.98■□□□□ 0.47
ACTB-210ENST00000477812 MAGIXQ9H6Y5 334 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 C12orf10Q9HB07 376 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 ACAD8Q9UKU7 415 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 ENPP4Q9Y6X5 453 aa17.98■□□□□ 0.47
ACTB-210ENST00000477812 TMED7-TICAM2A0A0A6YYA0 188 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 EIF4E1BA6NMX2 242 aaKnown RBP17.97■□□□□ 0.47
ACTB-210ENST00000477812 H3BML4 177 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 OR5F1O95221 314 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 CPN1P15169 458 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 POU3F2P20265 443 aaPredicted RBP17.97■□□□□ 0.47
ACTB-210ENST00000477812 FUT4P22083 530 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 PTGS2P35354 604 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 GCKP35557 465 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 MAGEA2P43356 314 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 CLDN20P56880 219 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 CTU2Q2VPK5 515 aaKnown RBP17.97■□□□□ 0.47
ACTB-210ENST00000477812 ALG10BQ5I7T1 473 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 EMC4Q5J8M3 183 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 C1orf146Q5VVC0 180 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 ULK3Q6PHR2 472 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 Q6ZPB1 254 aaPredicted RBP17.97■□□□□ 0.47
ACTB-210ENST00000477812 ZGRF1Q86YA3 2104 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 DNAJA4Q8WW22 397 aaPredicted RBP17.97■□□□□ 0.47
ACTB-210ENST00000477812 SARAFQ96BY9 339 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 ADGRG7Q96K78 797 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 PRRC1Q96M27 445 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 TMEM185BQ9H7F4 350 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 TMEM27Q9HBJ8 222 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 IL1RAPQ9NPH3 570 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 CHRNA9Q9UGM1 479 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 TMED7Q9Y3B3 224 aa17.97■□□□□ 0.47
ACTB-210ENST00000477812 TRAPPC13A5PLN9 417 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 NPIPA2E9PIF3 369 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 NPIPA3F8WFD2 350 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 H0YC42 278 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 J3KTA2 159 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 BCKDKO14874 412 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 STAMBPO95630 424 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 PEPDP12955 493 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 NQO1P15559 274 aaKnown RBP17.96■□□□□ 0.47
ACTB-210ENST00000477812 SUCLG1P53597 346 aaKnown RBP17.96■□□□□ 0.47
ACTB-210ENST00000477812 TPD52P55327 224 aaPredicted RBP17.96■□□□□ 0.47
ACTB-210ENST00000477812 PIN1Q13526 163 aaPredicted RBP17.96■□□□□ 0.47
ACTB-210ENST00000477812 CCNIQ14094 377 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 C3AR1Q16581 482 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 C3orf33Q6P1S2 294 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 POMZP3Q6PJE2 187 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 WDR88Q6ZMY6 472 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 LILRA2Q8N149 483 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 GALNT11Q8NCW6 608 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 FAM57AQ8TBR7 257 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 SLC38A4Q969I6 547 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 SLC47A1Q96FL8 570 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 ZNF300Q96RE9 604 aaPredicted RBP17.96■□□□□ 0.47
ACTB-210ENST00000477812 ZNF426Q9BUY5 554 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 MAN2C1Q9NTJ4 1040 aa17.96■□□□□ 0.47
ACTB-210ENST00000477812 IGKV1D-42A0A075B6H8 117 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 A0A087WUJ7 227 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 DHRS12A0PJE2 317 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 TMEM72A0PK05 275 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 hCG_2039718K7EN88 272 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 ADAMDEC1O15204 470 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms