RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 LRRC17Q8N6Y2 441 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 OR13C2Q8NGS9 318 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 OR4Q3Q8NH05 313 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 B4GALNT2Q8NHY0 566 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 FGF11Q92914 225 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 ZNF566Q969W8 418 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 MRPS26Q9BYN8 205 aaKnown RBP13.16□□□□□ -0.3
COL4A6-206ENST00000477085 MED11Q9P086 117 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 YARS2Q9Y2Z4 477 aaKnown RBP13.16□□□□□ -0.3
COL4A6-206ENST00000477085 ENO4A6NNW6 628 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 CLPTM1O96005 669 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 RBMS1P29558 406 aaKnown RBP13.15□□□□□ -0.3
COL4A6-206ENST00000477085 CRYZQ08257 329 aaKnown RBP13.15□□□□□ -0.3
COL4A6-206ENST00000477085 C17orf67Q0P5P2 114 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 QPRTQ15274 297 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 CLEC12AQ5QGZ9 265 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 ZNF563Q8TA94 476 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 NTNG2Q96CW9 530 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 SAMD8Q96LT4 415 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 IL4I1Q96RQ9 567 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 SLC25A19Q9HC21 320 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 PROK2Q9HC23 129 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 SH2D2AQ9NP31 389 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 OSGIN1Q9UJX0 560 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 SIGLEC7Q9Y286 467 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 AHCTF1Q8WYP5 2266 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 PTPRBP23467 1997 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 PCNX3Q9H6A9 2034 aa13.15□□□□□ -0.3
COL4A6-206ENST00000477085 PTGES3LE9PB15 166 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 SLC30A4O14863 429 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 PRKYO43930 277 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 CDC40O60508 579 aaKnown RBP eCLIP13.15□□□□□ -0.31
COL4A6-206ENST00000477085 SERPINA7P05543 415 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 CCDC159P0C7I6 412 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 ICAM2P13598 275 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 ENDOUP21128 410 aaKnown RBP13.15□□□□□ -0.31
COL4A6-206ENST00000477085 TMED10P49755 219 aaKnown RBP13.15□□□□□ -0.31
COL4A6-206ENST00000477085 CDC42P60953 191 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 CXCR4P61073 352 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 SRSF6Q13247 344 aaKnown RBP13.15□□□□□ -0.31
COL4A6-206ENST00000477085 CAMK2BQ13554 666 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 CBFBQ13951 182 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 THSD4Q6ZMP0 1018 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 BCDIN3DQ7Z5W3 292 aaKnown RBP13.15□□□□□ -0.31
COL4A6-206ENST00000477085 MISPQ8IVT2 679 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 DEPDC4Q8N2C3 294 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 IL22RA1Q8N6P7 574 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 SIRT6Q8N6T7 355 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 BRIX1Q8TDN6 353 aaKnown RBP13.15□□□□□ -0.31
COL4A6-206ENST00000477085 TNFRSF13CQ96RJ3 184 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 TSSK6Q9BXA6 273 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 TVP23BQ9NYZ1 205 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 SELENONQ9NZV5 590 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 CDH10Q9Y6N8 788 aa13.15□□□□□ -0.31
COL4A6-206ENST00000477085 ZFHX4Q86UP3 3567 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 TRAV27A0A087WT01 109 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 ELOA3DA6NLF2 546 aaPredicted RBP13.14□□□□□ -0.31
COL4A6-206ENST00000477085 EFCAB9A8MZ26 197 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 NUDT14O95848 222 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 PNMTP11086 282 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 PGCP20142 388 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 CCNA2P20248 432 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 SSR4P51571 173 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 LTBQ06643 244 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 ELOA3BQ3SY89 546 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 SLC30A6Q6NXT4 461 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 ARSKQ6UWY0 536 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 PTCHD4Q6ZW05 846 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 SLC46A3Q7Z3Q1 461 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 GALNT15Q8N3T1 639 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 CLDN22Q8N7P3 220 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 ELOA3Q8NG57 546 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 OR51A7Q8NH64 312 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 FAM117AQ9C073 453 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 OR52D1Q9H346 318 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 DUSP21Q9H596 190 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 METTL7AQ9H8H3 244 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 AMBNQ9NP70 447 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 KRCC1Q9NPI7 259 aaPredicted RBP13.14□□□□□ -0.31
COL4A6-206ENST00000477085 IMPAD1Q9NX62 359 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 KLRF1Q9NZS2 232 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 TMEM5Q9Y2B1 443 aa13.14□□□□□ -0.31
COL4A6-206ENST00000477085 A0A087WXM4 84 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 IGLV3-32A0A0A0MS00 114 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 ANKUB1A6NFN9 424 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 CCL3P10147 92 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 SAGP10523 405 aaPredicted RBP13.13□□□□□ -0.31
COL4A6-206ENST00000477085 LIFP15018 202 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 CD82P27701 267 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 SMSP52788 366 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 NUDT6P53370 316 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 SNRPGP62308 76 aaKnown RBP13.13□□□□□ -0.31
COL4A6-206ENST00000477085 SLC35A2P78381 396 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 TOP3AQ13472 1001 aaPredicted RBP13.13□□□□□ -0.31
COL4A6-206ENST00000477085 ATP1A1-AS1Q5TC04 95 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 PRAMEF20Q5VT98 475 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 C1QL3Q5VWW1 255 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 FOXB2Q5VYV0 432 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 SLC27A4Q6P1M0 643 aa13.13□□□□□ -0.31
COL4A6-206ENST00000477085 OPN5Q6U736 354 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms