RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 C9orf62Q8N4C0 152 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 DNAJC5GQ8N7S2 189 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 LSMEM1Q8N8F7 131 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 DOK4Q8TEW6 326 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 CNOT9Q92600 299 aaKnown RBP12.59□□□□□ -0.39
BRCA1-209ENST00000470026 GHSRQ92847 366 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 WDR92Q96MX6 357 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 CHRNA9Q9UGM1 479 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 ZNF860A6NHJ4 632 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 NOTOA8MTQ0 251 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 AKR7A2O43488 359 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 ADAM11O75078 769 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 CBX7O95931 251 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 SERPINA3P01011 423 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 NGFRP08138 427 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 NTSR1P30989 418 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 GABRA3P34903 492 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 HTR2BP41595 481 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 SEC13P55735 322 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 NTRK2Q16620 822 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 RPTNQ6XPR3 784 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 RNF44Q7L0R7 432 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 CADM2Q8N3J6 435 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 OR51A7Q8NH64 312 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 YIPF5Q969M3 257 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 ANKRD9Q96BM1 317 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-209ENST00000470026 BMFQ96LC9 184 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 TNFRSF13CQ96RJ3 184 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 MYADMQ96S97 322 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 ZNF275Q9NSD4 429 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-209ENST00000470026 NUBP2Q9Y5Y2 271 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 SPACA6W5XKT8 324 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 A0A1W2PQF6 199 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 TNFRSF10CO14798 259 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 CTDSPLO15194 276 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 GALR3O60755 368 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-209ENST00000470026 DHFRP00374 187 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 IFNGP01579 166 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 TFP02787 698 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 POLR2CP19387 275 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-209ENST00000470026 GDI1P31150 447 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 PYCR1P32322 319 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 ACTR1BP42025 376 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 RAG2P55895 527 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 ACTR1AP61163 376 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 MRPL28Q13084 256 aaKnown RBP12.58□□□□□ -0.4
BRCA1-209ENST00000470026 CAMK2BQ13554 666 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 EXOSC7Q15024 291 aaKnown RBP12.58□□□□□ -0.4
BRCA1-209ENST00000470026 CDK5R1Q15078 307 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 FCN2Q15485 313 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 HSD17B12Q53GQ0 312 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 FAM205BPQ63HN1 556 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 FCRLBQ6BAA4 426 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 ZNF782Q6ZMW2 699 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-209ENST00000470026 TMEFF1Q8IYR6 380 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 CA13Q8N1Q1 262 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 BMPERQ8N8U9 685 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 CYB561A3Q8NBI2 242 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 OR5H6Q8NGV6 325 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 BAHD1Q8TBE0 780 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-209ENST00000470026 FAM3CQ92520 227 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 SNAPC3Q92966 411 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 ELSPBP1Q96BH3 223 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 SMIM19Q96E16 107 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 KXD1Q9BQD3 176 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 LMF2Q9BU23 707 aaKnown RBP12.58□□□□□ -0.4
BRCA1-209ENST00000470026 TRIM2Q9C040 744 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 TMEM168Q9H0V1 697 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 DPAGT1Q9H3H5 408 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 EMC7Q9NPA0 242 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 EVA1BQ9NVM1 165 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 DZANK1Q9NVP4 752 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 DNAJB12Q9NXW2 375 aaKnown RBP12.58□□□□□ -0.4
BRCA1-209ENST00000470026 RNF215Q9Y6U7 377 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 SMLR1H3BR10 107 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 TNFRSF10AO00220 468 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 GSTZ1O43708 216 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-209ENST00000470026 UCHL1P09936 223 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 OR2T7P0C7T2 308 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 EPXP11678 715 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 ATF1P18846 271 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 COL9A1P20849 921 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 ACVR1BP36896 505 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 LSSP48449 732 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 SLC16A1P53985 500 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 RPS11P62280 158 aaKnown RBP eCLIP12.58□□□□□ -0.4
BRCA1-209ENST00000470026 CDONQ4KMG0 1287 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 CCDC58Q4VC31 144 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 UNQ9370/PRO34162Q6UXP9 181 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 BAIAP2L2Q6UXY1 529 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 CMIPQ8IY22 773 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 POMGNT2Q8NAT1 580 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 OR2T27Q8NH04 317 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 RPS4Y2Q8TD47 263 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 CMTM3Q96MX0 182 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 GPR137Q96N19 417 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 NECTIN4Q96NY8 510 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 OR2M2Q96R28 347 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 C7orf50Q9BRJ6 194 aaKnown RBP12.58□□□□□ -0.4
BRCA1-209ENST00000470026 SLCO1C1Q9NYB5 712 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms