RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ORC6Q9Y5N6 252 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 KCNMB2Q9Y691 235 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 OR10H3O60404 316 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 GP1BBP13224 206 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 IGFBP5P24593 272 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 FPR3P25089 353 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 APOBEC1P41238 236 aaKnown RBP11.59□□□□□ -0.55
TRAF4-208ENST00000469529 EIF1P41567 113 aaKnown RBP11.59□□□□□ -0.55
TRAF4-208ENST00000469529 TSPAN31Q12999 210 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 SRSF6Q13247 344 aaKnown RBP11.59□□□□□ -0.55
TRAF4-208ENST00000469529 IL18R1Q13478 541 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 FGD3Q5JSP0 725 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 WLSQ5T9L3 541 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 ATP1A1-AS1Q5TC04 95 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 IGFL3Q6UXB1 125 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 ZNF730Q6ZMV8 503 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 WDR88Q6ZMY6 472 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 PRICKLE2Q7Z3G6 844 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 MDGA2Q7Z553 956 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 DHRSXQ8N5I4 330 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 CLDN22Q8N7P3 220 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 PSD4Q8NDX1 1056 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 PIGXQ8TBF5 258 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 GNPDA2Q8TDQ7 276 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 SNRNP27Q8WVK2 155 aaKnown RBP11.59□□□□□ -0.55
TRAF4-208ENST00000469529 ZNF524Q96C55 264 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 DTNBP1Q96EV8 351 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 TACO1Q9BSH4 297 aaKnown RBP11.59□□□□□ -0.55
TRAF4-208ENST00000469529 UCK2Q9BZX2 261 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 GRIP2Q9C0E4 1043 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 Q9H521 79 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 GALNT9Q9HCQ5 603 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 PAPOLBQ9NRJ5 636 aaKnown RBP11.59□□□□□ -0.55
TRAF4-208ENST00000469529 FAM118AQ9NWS6 357 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 TAS2R10Q9NYW0 307 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 LRFN1Q9P244 771 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 REV1Q9UBZ9 1251 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 OSGIN1Q9UJX0 560 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 MED31Q9Y3C7 131 aa11.59□□□□□ -0.55
TRAF4-208ENST00000469529 ZFYVE26Q68DK2 2539 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 OR5H15A6NDH6 313 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 B4DXG7 233 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 ZNF208O43345 1280 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 FZD7O75084 574 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 NPIPB7O75200 414 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 PTP4A3O75365 173 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 SNAP29O95721 258 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 WDPCPO95876 746 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 OSMP13725 252 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 PRKCAP17252 672 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 TACR3P29371 465 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 CAPGP40121 348 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 CLK1P49759 484 aaKnown RBP11.58□□□□□ -0.56
TRAF4-208ENST00000469529 RNF144AP50876 292 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-208ENST00000469529 POLR2HP52434 150 aaKnown RBP11.58□□□□□ -0.56
TRAF4-208ENST00000469529 DSCR4P56555 118 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-208ENST00000469529 TLE3Q04726 772 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 NPRL3Q12980 569 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 KEAP1Q14145 624 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 LAPTM4AQ15012 233 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 QPRTQ15274 297 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 TOMM34Q15785 309 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-208ENST00000469529 HYAL4Q2M3T9 481 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 TMEM44Q2T9K0 475 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 ANKDD1AQ495B1 522 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 BICRALQ6AI39 1079 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 TTC33Q6PID6 262 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-208ENST00000469529 ADGRG3Q86Y34 549 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 NRMQ8IXM6 262 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 CDK20Q8IZL9 346 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 SLC43A2Q8N370 569 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 CADM2Q8N3J6 435 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 AQP11Q8NBQ7 271 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 MDS2Q8NDY4 140 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 ZNF563Q8TA94 476 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 STK35Q8TDR2 534 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 TMEM255BQ8WV15 326 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 ZBTB8AQ96BR9 441 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 C1GALT1C1Q96EU7 318 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 SH3YL1Q96HL8 342 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-208ENST00000469529 SMAD5Q99717 465 aaKnown RBP11.58□□□□□ -0.56
TRAF4-208ENST00000469529 NIPSNAP1Q9BPW8 284 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 ADI1Q9BV57 179 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 ANKRD60Q9BZ19 345 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 DSN1Q9H410 356 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 PRORYQ9H606 182 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 CTPS2Q9NRF8 586 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 KRT84Q9NSB2 600 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 MED17Q9NVC6 651 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 IL20Q9NYY1 176 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 MED11Q9P086 117 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 PCDHGB7Q9Y5F8 929 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 AP4B1Q9Y6B7 739 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 HSPE1-MOB4S4R3N1 261 aa11.58□□□□□ -0.56
TRAF4-208ENST00000469529 LOC100130705A0A1B0GUX0 176 aa11.57□□□□□ -0.56
TRAF4-208ENST00000469529 UGT2B15P54855 530 aa11.57□□□□□ -0.56
TRAF4-208ENST00000469529 UCNP55089 124 aa11.57□□□□□ -0.56
TRAF4-208ENST00000469529 FOXO1Q12778 655 aa11.57□□□□□ -0.56
TRAF4-208ENST00000469529 KCNAB2Q13303 367 aa11.57□□□□□ -0.56
TRAF4-208ENST00000469529 OR1C1Q15619 314 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms