RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ACER3Q9NUN7 267 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 ASIC5Q9NY37 505 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 PCDHGB4Q9UN71 923 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 ALPK2Q86TB3 2170 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 WDR91A4D1P6 747 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 ZNF724A8MTY0 619 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 RNASET2O00584 256 aaKnown RBP18.62■□□□□ 0.57
COL9A3-207ENST00000467819 TYROBPO43914 113 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 KIAA0513O60268 411 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 CPSF4O95639 269 aaKnown RBP18.62■□□□□ 0.57
COL9A3-207ENST00000467819 OR12D1P0DN82 309 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 ETV4P43268 484 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 CSNK2A1P68400 391 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-207ENST00000467819 DMTNQ08495 405 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 ATAD3BQ5T9A4 648 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 HEPHL1Q6MZM0 1159 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 TNFAIP8L2Q6P589 184 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-207ENST00000467819 TMPPEQ6ZT21 453 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 GALNT5Q7Z7M9 940 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 ZNF781Q8N8C0 355 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 ZNF563Q8TA94 476 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 XAGE5Q8WWM1 108 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 RAB8BQ92930 207 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 MUCL1Q96DR8 90 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 REG4Q9BYZ8 158 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 DPY30Q9C005 99 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 SLCO5A1Q9H2Y9 848 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 ALG2Q9H553 416 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 AKTIPQ9H8T0 292 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 CISD1Q9NZ45 108 aaKnown RBP18.62■□□□□ 0.57
COL9A3-207ENST00000467819 WDR45Q9Y484 360 aa18.62■□□□□ 0.57
COL9A3-207ENST00000467819 NDUFS7O75251 213 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 BCAS1O75363 584 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-207ENST00000467819 IGHV3-9P01782 118 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 IGHV4-39P01824 125 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 GGT1P19440 569 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 COX5AP20674 150 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 RYKP34925 604 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 CDH11P55287 796 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 SMU1Q2TAY7 513 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 ABLIM2Q6H8Q1 611 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 HMGN2P46Q86SG4 172 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 OR8J2Q8NGG1 315 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 SLC25A43Q8WUT9 341 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-207ENST00000467819 TRAF4Q9BUZ4 470 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-207ENST00000467819 CTPS2Q9NRF8 586 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 NPAP1Q9NZP6 1156 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 EMC3Q9P0I2 261 aa18.61■□□□□ 0.57
COL9A3-207ENST00000467819 SHISA9B4DS77 424 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 ABCD4O14678 606 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 RAD51DO75771 328 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 PTNP21246 168 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 UQCRC2P22695 453 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 PGM1P36871 562 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 FUT5Q11128 374 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 CHI3L2Q15782 390 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 TIMM23BQ5SRD1 257 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 TYW3Q6IPR3 259 aaKnown RBP18.6■□□□□ 0.57
COL9A3-207ENST00000467819 UBE2J2Q8N2K1 259 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 ZNF433Q8N7K0 673 aaPredicted RBP18.6■□□□□ 0.57
COL9A3-207ENST00000467819 FAM71CQ8NEG0 241 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 MIPOL1Q8TD10 442 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 HS6ST2Q96MM7 605 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 ZIM3Q96PE6 472 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 GDF2Q9UK05 429 aaPredicted RBP18.6■□□□□ 0.57
COL9A3-207ENST00000467819 SLC35A3Q9Y2D2 325 aa18.6■□□□□ 0.57
COL9A3-207ENST00000467819 SPIN1Q9Y657 262 aaPredicted RBP18.6■□□□□ 0.57
COL9A3-207ENST00000467819 OR5H1A6NKK0 313 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 ADAM11O75078 769 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 CRLF1O75462 422 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 AGR2O95994 175 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 CD8AP01732 235 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 SERPINE1P05121 402 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 APOBEC1P41238 236 aaKnown RBP18.59■□□□□ 0.57
COL9A3-207ENST00000467819 ABCE1P61221 599 aaKnown RBP18.59■□□□□ 0.57
COL9A3-207ENST00000467819 PHC1P78364 1004 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 DNAJC14Q6Y2X3 702 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-207ENST00000467819 FRRS1Q6ZNA5 592 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 MTDHQ86UE4 582 aaKnown RBP18.59■□□□□ 0.57
COL9A3-207ENST00000467819 LSRQ86X29 649 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-207ENST00000467819 ROPN1LQ96C74 230 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 ZHX1-C8orf76Q96EF9 292 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 ARL5BQ96KC2 179 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 CCDC106Q9BWC9 280 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 CHRNA9Q9UGM1 479 aa18.59■□□□□ 0.57
COL9A3-207ENST00000467819 NOSIPQ9Y314 301 aaKnown RBP18.59■□□□□ 0.57
COL9A3-207ENST00000467819 IGKV3D-15A0A087WSY6 115 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 PRSS51A0A1B0GVH4 220 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 CIB4A0PJX0 185 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 SCN2BO60939 215 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 TP53P04637 393 aaPredicted RBP18.58■□□□□ 0.56
COL9A3-207ENST00000467819 CCNA2P20248 432 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 CHI3L1P36222 383 aaPredicted RBP18.58■□□□□ 0.56
COL9A3-207ENST00000467819 KHKP50053 298 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 GPAT3Q53EU6 434 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 ANXA8L1Q5VT79 327 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 FBXW9Q5XUX1 488 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 SAXO2Q658L1 398 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 DTX2Q86UW9 622 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 P2RY8Q86VZ1 359 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms