RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 UBL4AP11441 157 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 NAA20P61599 178 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 TGFBR3Q03167 851 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 MERTKQ12866 999 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 SYT14P1Q58G82 188 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 C1QTNF12Q5T7M4 302 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 C9orf135Q5VTT2 229 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 TIFABQ6ZNK6 161 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 ANKS4BQ8N8V4 417 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 SGMS2Q8NHU3 365 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 PIGXQ8TBF5 258 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 SLC25A43Q8WUT9 341 aaPredicted RBP12.66□□□□□ -0.38
SMC1A-204ENST00000463684 TMEM234Q8WY98 164 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 ST8SIA1Q92185 356 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 CCDC126Q96EE4 140 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 TSSK3Q96PN8 268 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 CCT7Q99832 543 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 SOX7Q9BT81 388 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 THUMPD3Q9BV44 507 aaKnown RBP12.66□□□□□ -0.38
SMC1A-204ENST00000463684 ACTRT3Q9BYD9 372 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 SLC17A5Q9NRA2 495 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 METRNQ9UJH8 293 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 DCTN4Q9UJW0 460 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 FAF1Q9UNN5 650 aaPredicted RBP12.66□□□□□ -0.38
SMC1A-204ENST00000463684 A0A0A6YYJ9 748 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 LRP5LA4QPB2 252 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 ZNF716A6NP11 495 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 ESPNB1AK53 854 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 NPIPB8E9PQR5 432 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 SLCO1B7G3V0H7 640 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 WNT11O96014 354 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 ITGA5P08648 1049 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 KRT16P08779 473 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 UROSP10746 265 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 EFNA1P20827 205 aaPredicted RBP12.65□□□□□ -0.38
SMC1A-204ENST00000463684 PRPH2P23942 346 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 SERPINF1P36955 418 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 CHN2P52757 468 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 FOXG1P55316 489 aaPredicted RBP12.65□□□□□ -0.38
SMC1A-204ENST00000463684 SESN3P58005 492 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 PRPS1P60891 318 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 KLHL24Q6TFL4 600 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 C3orf56Q8N813 242 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 LINC01356Q8N9X3 169 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 C1orf162Q8NEQ5 155 aaPredicted RBP12.65□□□□□ -0.38
SMC1A-204ENST00000463684 OR52E4Q8NGH9 312 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 ZFAND2BQ8WV99 257 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 HPS1Q92902 700 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 MTERF3Q96E29 417 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 KCNS3Q9BQ31 491 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 PARPBPQ9NWS1 579 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 BAIAP2L1Q9UHR4 511 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 CCL27Q9Y4X3 112 aa12.65□□□□□ -0.38
SMC1A-204ENST00000463684 SPIN1Q9Y657 262 aaPredicted RBP12.65□□□□□ -0.38
SMC1A-204ENST00000463684 MALRD1Q5VYJ5 2156 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 A0A087WUV0 522 aaPredicted RBP12.64□□□□□ -0.39
SMC1A-204ENST00000463684 B9A039 149 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 NPIPB9F8W1W9 429 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 SNUPNO95149 360 aaKnown RBP12.64□□□□□ -0.39
SMC1A-204ENST00000463684 SDC1P18827 310 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 PGCP20142 388 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 PCMT1P22061 227 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 APEX1P27695 318 aaKnown RBP12.64□□□□□ -0.39
SMC1A-204ENST00000463684 NTF4P34130 210 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 MAGEA8P43361 318 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 CCT3P49368 545 aaKnown RBP12.64□□□□□ -0.39
SMC1A-204ENST00000463684 ACTG1P63261 375 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 TP53BP2Q13625 1128 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 PDE7AQ13946 482 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 FAM174BQ3ZCQ3 159 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 SPDYE7PQ495Y7 208 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 CFAP157Q5JU67 520 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 C8orf74Q6P047 294 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 UGT2A3Q6UWM9 527 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 CASP12Q6UXS9 341 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 R3HCC1LQ7Z5L2 792 aaKnown RBP12.64□□□□□ -0.39
SMC1A-204ENST00000463684 SPATA19Q7Z5L4 167 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 CLHC1Q8NHS4 586 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 LAT2Q9GZY6 243 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 RAB1BQ9H0U4 201 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 SIRT3Q9NTG7 399 aaPredicted RBP12.64□□□□□ -0.39
SMC1A-204ENST00000463684 FBXO9Q9UK97 447 aaPredicted RBP12.64□□□□□ -0.39
SMC1A-204ENST00000463684 KCNE3Q9Y6H6 103 aa12.64□□□□□ -0.39
SMC1A-204ENST00000463684 EXOC1LA0A1B0GW35 172 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 SERINC4A6NH21 518 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 PDLIM1O00151 329 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 KCNAB3O43448 404 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 STAMBPO95630 424 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 PMS2P2O95744 297 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 ERCC1P07992 297 aaPredicted RBP12.63□□□□□ -0.39
SMC1A-204ENST00000463684 MYL2P10916 166 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 EGR1P18146 543 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 FKBP2P26885 142 aaKnown RBP12.63□□□□□ -0.39
SMC1A-204ENST00000463684 APOBEC1P41238 236 aaKnown RBP12.63□□□□□ -0.39
SMC1A-204ENST00000463684 ASMTP46597 345 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 SLC16A1P53985 500 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 PDZK1Q5T2W1 519 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 CCDC103Q8IW40 242 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 OR56A1Q8NGH5 318 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 ACER3Q9NUN7 267 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms