RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SECISBP2Q96T21 854 aaKnown RBP2.28□□□□□ -2.04
HDAC6-212ENST00000461608 CNPY3Q9BT09 278 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 SPATA16Q9BXB7 569 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 CAPS2Q9BXY5 557 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 SRXN1Q9BYN0 137 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 SLITRK2Q9H156 845 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 Q9H3A6 140 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 IKZF5Q9H5V7 419 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 NHEJ1Q9H9Q4 299 aaPredicted RBP2.28□□□□□ -2.04
HDAC6-212ENST00000461608 FN3KRPQ9HA64 309 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 VNN3Q9NY84 501 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 N6AMT1Q9Y5N5 214 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 LRP5LA4QPB2 252 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 HELTA6NFD8 242 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 CDX4O14627 284 aaPredicted RBP2.27□□□□□ -2.05
HDAC6-212ENST00000461608 PRRG1O14668 218 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 TNFSF11O14788 317 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 MED7O43513 233 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 PRKAB2O43741 272 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 OR10H3O60404 316 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 B4GALT2O60909 372 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 SLITRK3O94933 977 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 GNA14O95837 355 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 TSPAN12O95859 305 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 SEMG1P04279 462 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 FASP25445 335 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 HOXD10P28358 340 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 IL2RGP31785 369 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 CASP4P49662 377 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 CDH4P55283 916 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 CCDC173Q0VFZ6 552 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 KLRB1Q12918 225 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 ARL6IP1Q15041 203 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 SSX2Q16385 188 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 AANATQ16613 207 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 IMMTQ16891 758 aaKnown RBP2.27□□□□□ -2.05
HDAC6-212ENST00000461608 KLHL38Q2WGJ6 581 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 TRIM16LQ309B1 348 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 GGTA1PQ4G0N0 100 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 TPGS2Q68CL5 300 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 ZSCAN25Q6NSZ9 544 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 NBPF5PQ86XG9 351 aaPredicted RBP2.27□□□□□ -2.05
HDAC6-212ENST00000461608 HPS6Q86YV9 775 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 TMEM123Q8N131 208 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 OR4D9Q8NGE8 314 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 OR2A12Q8NGT7 310 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 DNAJA4Q8WW22 397 aaPredicted RBP2.27□□□□□ -2.05
HDAC6-212ENST00000461608 N4BP2L2Q92802 583 aaPredicted RBP2.27□□□□□ -2.05
HDAC6-212ENST00000461608 TPD52L3Q96J77 140 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 SERAC1Q96JX3 654 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 IL4I1Q96RQ9 567 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 CLCC1Q96S66 551 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 CCNL2Q96S94 520 aaPredicted RBP2.27□□□□□ -2.05
HDAC6-212ENST00000461608 CYP2S1Q96SQ9 504 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 MYCBPQ99417 103 aaPredicted RBP2.27□□□□□ -2.05
HDAC6-212ENST00000461608 PLIN2Q99541 437 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 COPS8Q99627 209 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 NPAS2Q99743 824 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF670Q9BS34 389 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 DEFB126Q9BYW3 111 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 GCOM2Q9BZD3 368 aaPredicted RBP2.27□□□□□ -2.05
HDAC6-212ENST00000461608 PKIBQ9C010 78 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 GLIPR2Q9H4G4 154 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 EHD1Q9H4M9 534 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 AZI2Q9H6S1 392 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 MCCC2Q9HCC0 563 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF275Q9NSD4 429 aaPredicted RBP2.27□□□□□ -2.05
HDAC6-212ENST00000461608 PAK1IP1Q9NWT1 392 aaPredicted RBP2.27□□□□□ -2.05
HDAC6-212ENST00000461608 SIGLEC8Q9NYZ4 499 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 IL36GQ9NZH8 169 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 TMCO1Q9UM00 188 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 HPCAL4Q9UM19 191 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 CLEC4AQ9UMR7 237 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 POLDIP2Q9Y2S7 368 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 ASB3Q9Y575 518 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 TIMM10BQ9Y5J6 103 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 RALGAPA1Q6GYQ0 2036 aa2.27□□□□□ -2.05
HDAC6-212ENST00000461608 FAM168BA1KXE4 195 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 CCDC182A6NF36 153 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 FRG2CA6NGY1 282 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 SNTNA6NMZ2 147 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF705EA8MWA4 302 aaPredicted RBP2.26□□□□□ -2.05
HDAC6-212ENST00000461608 IDSB3KWA1 339 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 LATO43561 262 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 HCRTR1O43613 425 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 HMMRO75330 724 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 SURF6O75683 361 aaKnown RBP2.26□□□□□ -2.05
HDAC6-212ENST00000461608 IGHV3-23P01764 117 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 VDAC1P21796 283 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 IL12AP29459 219 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 CALCRP30988 508 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 RFC4P35249 363 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 UGT1A5P35504 534 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 RGRP47804 291 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 LIM2P55344 173 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 DSCR10P59022 87 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 UBE2HP62256 183 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 C1orf61Q13536 156 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 TP53I3Q53FA7 332 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 CTSL3PQ5NE16 218 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms