RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 C7orf26Q96N11 449 aa17.26■□□□□ 0.35
USP40-207ENST00000450940 C12orf49Q9H741 205 aa17.26■□□□□ 0.35
USP40-207ENST00000450940 BEX4Q9NWD9 120 aaPredicted RBP17.26■□□□□ 0.35
USP40-207ENST00000450940 ACANP16112 2415 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 CLDN24A6NM45 220 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 UBDO15205 165 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 KLF4O43474 513 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 CYTIPO60759 359 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 ADAM11O75078 769 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 GCM2O75603 506 aaPredicted RBP17.25■□□□□ 0.35
USP40-207ENST00000450940 FKBP2P26885 142 aaKnown RBP17.25■□□□□ 0.35
USP40-207ENST00000450940 MRPL19P49406 292 aaKnown RBP17.25■□□□□ 0.35
USP40-207ENST00000450940 HPCAP84074 193 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 TMPPEQ6ZT21 453 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 ARFGAP2Q8N6H7 521 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 CNOT9Q92600 299 aaKnown RBP17.25■□□□□ 0.35
USP40-207ENST00000450940 PIK3IP1Q96FE7 263 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 OR5B2Q96R09 309 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 PSD2Q9BQI7 771 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 HDHD5Q9BXW7 423 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 KLHL9Q9P2J3 617 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 PRDM4Q9UKN5 801 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 USH1CQ9Y6N9 552 aa17.25■□□□□ 0.35
USP40-207ENST00000450940 FLNAP21333 2647 aaKnown RBP17.24■□□□□ 0.35
USP40-207ENST00000450940 FAAHO00519 579 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 SMAD9O15198 467 aaKnown RBP17.24■□□□□ 0.35
USP40-207ENST00000450940 TGDSO95455 350 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 CD99P14209 185 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 CLK1P49759 484 aaKnown RBP17.24■□□□□ 0.35
USP40-207ENST00000450940 DIO1P49895 249 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 POLR2JP52435 117 aaKnown RBP17.24■□□□□ 0.35
USP40-207ENST00000450940 RIPPLY3P57055 190 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 ADAM8P78325 824 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 SYT14P1Q58G82 188 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 GRINAQ7Z429 371 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 CXorf67Q86X51 503 aaPredicted RBP17.24■□□□□ 0.35
USP40-207ENST00000450940 ADGRG3Q86Y34 549 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 ZC3HAV1LQ96H79 300 aaKnown RBP17.24■□□□□ 0.35
USP40-207ENST00000450940 HS3ST6Q96QI5 342 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 PIP5K1AQ99755 562 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 CHRNA9Q9UGM1 479 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 SPIN1Q9Y657 262 aaPredicted RBP17.24■□□□□ 0.35
USP40-207ENST00000450940 DSCAMO60469 2012 aa17.24■□□□□ 0.35
USP40-207ENST00000450940 C2CD3Q4AC94 2353 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 ZNF724A8MTY0 619 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 DIAPH2O60879 1101 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 NR2F1P10589 423 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 KLK2P20151 261 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 HOXC12P31275 282 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 RYKP34925 604 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 CSNK2A1P68400 391 aaPredicted RBP17.23■□□□□ 0.35
USP40-207ENST00000450940 RASGEF1BQ0VAM2 473 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 PDK3Q15120 406 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 BEX5Q5H9J7 111 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 HMGN2P46Q86SG4 172 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 MIER2Q8N344 545 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 STEAP2Q8NFT2 490 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 ZNF563Q8TA94 476 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 PNPT1Q8TCS8 783 aaKnown RBP17.23■□□□□ 0.35
USP40-207ENST00000450940 ITCHQ96J02 903 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 ATP6V1G3Q96LB4 118 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 ACTR6Q9GZN1 396 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 RMND5AQ9H871 391 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 CTPS2Q9NRF8 586 aa17.23■□□□□ 0.35
USP40-207ENST00000450940 ROS1P08922 2347 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 DSPPQ9NZW4 1301 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 NF1P21359 2839 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 VPS13CQ709C8 3753 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 IGHV3-15A0A0B4J1V0 119 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 FAM234BA2RU67 622 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 ZNF814B7Z6K7 855 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 SULT2B1O00204 365 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 DNPH1O43598 174 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 PMS2P2O95744 297 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 DBIP07108 87 aaKnown RBP17.22■□□□□ 0.35
USP40-207ENST00000450940 HTR3AP46098 478 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 OR3A2P47893 321 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 P2RY6Q15077 328 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 ACKR1Q16570 336 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 SFRP5Q5T4F7 317 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 MTDHQ86UE4 582 aaKnown RBP17.22■□□□□ 0.35
USP40-207ENST00000450940 OR9I1Q8NGQ6 314 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 WDR60Q8WVS4 1066 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 TPT1P8Q9HAU6 139 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 HDGFL3Q9Y3E1 203 aa17.22■□□□□ 0.35
USP40-207ENST00000450940 IGKV3D-15A0A087WSY6 115 aa17.21■□□□□ 0.35
USP40-207ENST00000450940 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.21■□□□□ 0.35
USP40-207ENST00000450940 FESP07332 822 aa17.21■□□□□ 0.35
USP40-207ENST00000450940 TFPTP0C1Z6 253 aa17.21■□□□□ 0.35
USP40-207ENST00000450940 IL7RP16871 459 aa17.21■□□□□ 0.35
USP40-207ENST00000450940 FPR1P21462 350 aa17.21■□□□□ 0.35
USP40-207ENST00000450940 IDH2P48735 452 aaKnown RBP17.21■□□□□ 0.35
USP40-207ENST00000450940 MAP2K6P52564 334 aa17.21■□□□□ 0.35
USP40-207ENST00000450940 PPP2R2AP63151 447 aa17.21■□□□□ 0.35
USP40-207ENST00000450940 FOXD4Q12950 439 aaPredicted RBP17.21■□□□□ 0.35
USP40-207ENST00000450940 GNA13Q14344 377 aa17.21■□□□□ 0.35
USP40-207ENST00000450940 TTMPQ5BVD1 217 aa17.21■□□□□ 0.35
USP40-207ENST00000450940 ABLIM2Q6H8Q1 611 aa17.21■□□□□ 0.35
USP40-207ENST00000450940 KRTAP1-3Q8IUG1 177 aa17.21■□□□□ 0.35
USP40-207ENST00000450940 GTF2H4Q92759 462 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms