RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 ASB6Q9NWX5 421 aa21.45■■□□□ 1.02
PMS1-214ENST00000446877 ATP23Q9Y6H3 246 aa21.45■■□□□ 1.02
PMS1-214ENST00000446877 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.45■■□□□ 1.02
PMS1-214ENST00000446877 A0A1W2PR80 420 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 SERINC4A6NH21 518 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 SCAMP2O15127 329 aaKnown RBP21.44■■□□□ 1.02
PMS1-214ENST00000446877 MERTKQ12866 999 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 PDK3Q15120 406 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 LSM12Q3MHD2 195 aaKnown RBP21.44■■□□□ 1.02
PMS1-214ENST00000446877 LIPMQ5VYY2 423 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 RNF165Q6ZSG1 346 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 HOMEZQ8IX15 550 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 DDIASQ8IXT1 998 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 NATD1Q8N6N6 113 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 OR7A2PQ8NGA2 310 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 MZB1Q8WU39 189 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 LAT2Q9GZY6 243 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 TUBB1Q9H4B7 451 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 FKRPQ9H9S5 495 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 ATAD3AQ9NVI7 634 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 GPATCH2Q9NW75 528 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 TAS2R16Q9NYV7 291 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 KCNS2Q9ULS6 477 aa21.44■■□□□ 1.02
PMS1-214ENST00000446877 IGKV3D-15A0A087WSY6 115 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 GPR171O14626 319 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 TFPIP10646 304 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 LAMP1P11279 417 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 MAPK1P28482 360 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 SESN3P58005 492 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 SYT14P1Q58G82 188 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 PDZK1Q5T2W1 519 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 B3GLCTQ6Y288 498 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 ARIH2OSQ8N7S6 290 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 PSMA8Q8TAA3 256 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 SLC25A43Q8WUT9 341 aaPredicted RBP21.43■■□□□ 1.02
PMS1-214ENST00000446877 MOAP1Q96BY2 351 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 TRMOQ9BU70 441 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 C1QTNF6Q9BXI9 259 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 SPIN1Q9Y657 262 aaPredicted RBP21.43■■□□□ 1.02
PMS1-214ENST00000446877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.43■■□□□ 1.02
PMS1-214ENST00000446877 SVEP1Q4LDE5 3571 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 PLCE1Q9P212 2302 aa21.43■■□□□ 1.02
PMS1-214ENST00000446877 ESPNB1AK53 854 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 PGCP20142 388 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 CRHR1P34998 444 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 ABLIM2Q6H8Q1 611 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 FAM166AQ6J272 317 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 BHLHB9Q6PI77 547 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 MUS81Q96NY9 551 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 OR7D2Q96RA2 312 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 SDF2Q99470 211 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 PRPF18Q99633 342 aaKnown RBP21.42■■□□□ 1.02
PMS1-214ENST00000446877 NMUR2Q9GZQ4 415 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 CHODLQ9H9P2 273 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 DNAJC15Q9Y5T4 150 aa21.42■■□□□ 1.02
PMS1-214ENST00000446877 CFLARO15519 480 aa21.41■■□□□ 1.02
PMS1-214ENST00000446877 MRPL33O75394 65 aaKnown RBP21.41■■□□□ 1.02
PMS1-214ENST00000446877 C6orf47O95873 294 aa21.41■■□□□ 1.02
PMS1-214ENST00000446877 CSTAP01040 98 aa21.41■■□□□ 1.02
PMS1-214ENST00000446877 HNF1AP20823 631 aa21.41■■□□□ 1.02
PMS1-214ENST00000446877 SKP2Q13309 424 aa21.41■■□□□ 1.02
PMS1-214ENST00000446877 GPR68Q15743 365 aa21.41■■□□□ 1.02
PMS1-214ENST00000446877 KANK2Q63ZY3 851 aa21.41■■□□□ 1.02
PMS1-214ENST00000446877 SFXN5Q8TD22 340 aa21.41■■□□□ 1.02
PMS1-214ENST00000446877 ACER3Q9NUN7 267 aa21.41■■□□□ 1.02
PMS1-214ENST00000446877 LOC100289279A0A1B0GTE1 492 aa21.4■■□□□ 1.02
PMS1-214ENST00000446877 APOBEC3AP31941 199 aaPredicted RBP21.4■■□□□ 1.02
PMS1-214ENST00000446877 GGTLC2Q14390 218 aa21.4■■□□□ 1.02
PMS1-214ENST00000446877 GABRA6Q16445 453 aa21.4■■□□□ 1.02
PMS1-214ENST00000446877 EIF3MQ7L2H7 374 aaKnown RBP21.4■■□□□ 1.02
PMS1-214ENST00000446877 IFT20Q8IY31 132 aa21.4■■□□□ 1.02
PMS1-214ENST00000446877 OR5D16Q8NGK9 328 aa21.4■■□□□ 1.02
PMS1-214ENST00000446877 PIGXQ8TBF5 258 aa21.4■■□□□ 1.02
PMS1-214ENST00000446877 PPP3R2Q96LZ3 170 aa21.4■■□□□ 1.02
PMS1-214ENST00000446877 C12orf65Q9H3J6 166 aaKnown RBP21.4■■□□□ 1.02
PMS1-214ENST00000446877 MID2Q9UJV3 735 aa21.4■■□□□ 1.02
PMS1-214ENST00000446877 TRAF6Q9Y4K3 522 aa21.4■■□□□ 1.02
PMS1-214ENST00000446877 DUXAA6NLW8 204 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 ZNF716A6NP11 495 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 COPEO14579 308 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 DNAJA2O60884 412 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 STX11O75558 287 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 LYPLA1O75608 230 aaPredicted RBP21.39■■□□□ 1.01
PMS1-214ENST00000446877 UBTFL6P0CB48 400 aaPredicted RBP21.39■■□□□ 1.01
PMS1-214ENST00000446877 IGFBP5P24593 272 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 APOBEC1P41238 236 aaKnown RBP21.39■■□□□ 1.01
PMS1-214ENST00000446877 PDLIM4P50479 330 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 ZNF141Q15928 474 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 FAM120AOSQ5T036 256 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 C10orf107Q8IVU9 208 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 TWIST2Q8WVJ9 160 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 GATA5Q9BWX5 397 aaPredicted RBP21.39■■□□□ 1.01
PMS1-214ENST00000446877 MALT1Q9UDY8 824 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 FKBP7Q9Y680 259 aa21.39■■□□□ 1.01
PMS1-214ENST00000446877 ANKRD28O15084 1053 aa21.38■■□□□ 1.01
PMS1-214ENST00000446877 PEX11AO75192 247 aa21.38■■□□□ 1.01
PMS1-214ENST00000446877 LY6HO94772 140 aa21.38■■□□□ 1.01
PMS1-214ENST00000446877 AK1P00568 194 aa21.38■■□□□ 1.01
PMS1-214ENST00000446877 SRSF2Q01130 221 aaKnown RBP21.38■■□□□ 1.01
PMS1-214ENST00000446877 LIPNQ5VXI9 398 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms