RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 CARTPTQ16568 116 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 PDZK1Q5T2W1 519 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 LIPNQ5VXI9 398 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 MTDHQ86UE4 582 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 CCDC63Q8NA47 563 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 OR7A2PQ8NGA2 310 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 OR56A1Q8NGH5 318 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 DNAJA3Q96EY1 480 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 FKRPQ9H9S5 495 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 TAS2R16Q9NYV7 291 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 ATP6V1HQ9UI12 483 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 TRAF6Q9Y4K3 522 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 MALRD1Q5VYJ5 2156 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 IGKV3D-15A0A087WSY6 115 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 SERINC4A6NH21 518 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 ETV2O00321 342 aaPredicted RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 SCAMP2O15127 329 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 KIAA0513O60268 411 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 MRPL33O75394 65 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 CHEK2O96017 543 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 BCKDHAP12694 445 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 APEHP13798 732 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 CPA3P15088 417 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 APOBEC3AP31941 199 aaPredicted RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 PDK3Q15120 406 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 SYT14P1Q58G82 188 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 C9orf135Q5VTT2 229 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 LIPMQ5VYY2 423 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 ABLIM2Q6H8Q1 611 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 OR7E24Q6IFN5 339 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 NOA1Q8NC60 698 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 TMEM234Q8WY98 164 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 OR5P2Q8WZ92 322 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 ST8SIA1Q92185 356 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 MSI2Q96DH6 328 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 FBXO17Q96EF6 278 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 ZHX1-C8orf76Q96EF9 292 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 MUS81Q96NY9 551 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 OR7D2Q96RA2 312 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 PIMREGQ9BSJ6 248 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 TRMOQ9BU70 441 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 PRR14Q9BWN1 585 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 LAT2Q9GZY6 243 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 TUBB1Q9H4B7 451 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 HEATR1Q9H583 2144 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 EML4Q9HC35 981 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 GPATCH2Q9NW75 528 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 PSMC3IPQ9P2W1 217 aaPredicted RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 TMED5Q9Y3A6 229 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 PLCE1Q9P212 2302 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 ZNF716A6NP11 495 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 VWC2LB2RUY7 222 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 GPR171O14626 319 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 LSM1O15116 133 aaKnown RBP10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 RIPK2O43353 540 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 PLIN3O60664 434 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 C6orf47O95873 294 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 CSTAP01040 98 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 LAMP1P11279 417 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 PGCP20142 388 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 NTF4P34130 210 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 NR4A2P43354 598 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 PHC1P78364 1004 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 SQLEQ14534 574 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 GPR68Q15743 365 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 CCDC153Q494R4 210 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 TRMT10CQ7L0Y3 403 aaKnown RBP10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 DDIASQ8IXT1 998 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 WDR31Q8NA23 367 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 OR52E4Q8NGH9 312 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 OR5D16Q8NGK9 328 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 OR5AK3PQ8NH89 298 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 MZB1Q8WU39 189 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 SLC25A43Q8WUT9 341 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 SDF2Q99470 211 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 C12orf65Q9H3J6 166 aaKnown RBP10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 ACER3Q9NUN7 267 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 OXSMQ9NWU1 459 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 FKBP7Q9Y680 259 aa10.17□□□□□ -0.78
CHRNA1-207ENST00000435083 TMEM114B3SHH9 223 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 ATP6V1G2-DDX39BF2Z307 99 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 NDUFS8O00217 210 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 CFLARO15519 480 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 TGFAP01135 160 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 ITGA5P08648 1049 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 UBTFL6P0CB48 400 aaPredicted RBP10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 RPL3P39023 403 aaKnown RBP10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 SKP2Q13309 424 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 WHAMMP3Q1A5X7 153 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 LSM12Q3MHD2 195 aaKnown RBP10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 IQCCQ4KMZ1 466 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 CASP12Q6UXS9 341 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 OLIG3Q7RTU3 272 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 CCDC103Q8IW40 242 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 PIGXQ8TBF5 258 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 ARL5BQ96KC2 179 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 FOXN4Q96NZ1 517 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 SORCS2Q96PQ0 1159 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 SLC17A5Q9NRA2 495 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms