RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 A0A1W2PPM1 405 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 ESPNB1AK53 854 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 ETV2O00321 342 aaPredicted RBP16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 LSM1O15116 133 aaKnown RBP16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 SCAMP2O15127 329 aaKnown RBP16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 PLIN3O60664 434 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 BMP4P12644 408 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 CHRNB3Q05901 458 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 GGTLC2Q14390 218 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 CCDC153Q494R4 210 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 SYT14P1Q58G82 188 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 LIPMQ5VYY2 423 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 FAM166AQ6J272 317 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 TMPPEQ6ZT21 453 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 ST8SIA1Q92185 356 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 THUMPD3Q9BV44 507 aaKnown RBP16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 GPATCH2Q9NW75 528 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 OXSMQ9NWU1 459 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 ASB6Q9NWX5 421 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 TAS2R16Q9NYV7 291 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 ATP6V1HQ9UI12 483 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 TRAF6Q9Y4K3 522 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 PMF1-BGLAPU3KQ54 211 aa16.09■□□□□ 0.17
UPK3BP1-201ENST00000428678 IGKV3D-15A0A087WSY6 115 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 LOC100289279A0A1B0GTE1 492 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 SERINC4A6NH21 518 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 TFPIP10646 304 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 LAMP1P11279 417 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 CPA3P15088 417 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 SESN3P58005 492 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 SKP2Q13309 424 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 FAM120AOSQ5T036 256 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 MTDHQ86UE4 582 aaKnown RBP16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 DDIASQ8IXT1 998 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 OR5P2Q8WZ92 322 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 ZHX1-C8orf76Q96EF9 292 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 LAT2Q9GZY6 243 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 C12orf65Q9H3J6 166 aaKnown RBP16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 FKRPQ9H9S5 495 aa16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
UPK3BP1-201ENST00000428678 SLC35F4A4IF30 521 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 TMEM114B3SHH9 223 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 C6orf47O95873 294 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 HNF1AP20823 631 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 RPL3P39023 403 aaKnown RBP16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 PDK3Q15120 406 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 GPR68Q15743 365 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 OR7E24Q6IFN5 339 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 OR5D16Q8NGK9 328 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 OR5AK3PQ8NH89 298 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 SLC25A43Q8WUT9 341 aaPredicted RBP16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 TMEM234Q8WY98 164 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 DNAJA3Q96EY1 480 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 OR7D2Q96RA2 312 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 DNAJC15Q9Y5T4 150 aa16.07■□□□□ 0.16
UPK3BP1-201ENST00000428678 ZNF716A6NP11 495 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 GPR171O14626 319 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 MRPL33O75394 65 aaKnown RBP16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 CSTAP01040 98 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 UBTFL6P0CB48 400 aaPredicted RBP16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 PGCP20142 388 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 MAPK1P28482 360 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 PDLIM4P50479 330 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 FOXG1P55316 489 aaPredicted RBP16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 GABRA6Q16445 453 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 LSM12Q3MHD2 195 aaKnown RBP16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 C9orf135Q5VTT2 229 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 KANK2Q63ZY3 851 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 RNF165Q6ZSG1 346 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 CNPY4Q8N129 248 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 MNS1Q8NEH6 495 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 PSMA8Q8TAA3 256 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 PIGXQ8TBF5 258 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 SFXN5Q8TD22 340 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 C3orf49Q96BT1 292 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 SDF2Q99470 211 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 PIMREGQ9BSJ6 248 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 TRMOQ9BU70 441 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 NMUR2Q9GZQ4 415 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 ACER3Q9NUN7 267 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 ATAD3AQ9NVI7 634 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 MALT1Q9UDY8 824 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 GIMAP2Q9UG22 337 aa16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 SPIN1Q9Y657 262 aaPredicted RBP16.06■□□□□ 0.16
UPK3BP1-201ENST00000428678 CFLARO15519 480 aa16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 ITGA5P08648 1049 aa16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 APEHP13798 732 aaKnown RBP16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 APOBEC3AP31941 199 aaPredicted RBP16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 NTF4P34130 210 aa16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 SOAT1P35610 550 aa16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 CCT5P48643 541 aa16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 RPS26P62854 115 aaKnown RBP16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 CARTPTQ16568 116 aa16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 CASP12Q6UXS9 341 aa16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 C10orf107Q8IVU9 208 aa16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 OR52E4Q8NGH9 312 aa16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 TWIST2Q8WVJ9 160 aa16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 MOAP1Q96BY2 351 aa16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 MSI2Q96DH6 328 aaKnown RBP16.05■□□□□ 0.16
UPK3BP1-201ENST00000428678 FBXO17Q96EF6 278 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms