RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 NUP37Q8NFH4 326 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 FBXO30Q8TB52 745 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 GTF3AQ92664 365 aaKnown RBP7.84□□□□□ -1.15
LSG1-202ENST00000427461 ATOH8Q96SQ7 321 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 LMF2Q9BU23 707 aaKnown RBP7.84□□□□□ -1.15
LSG1-202ENST00000427461 KCNF1Q9H3M0 494 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 IPPKQ9H8X2 491 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 FARSBQ9NSD9 589 aaKnown RBP7.84□□□□□ -1.15
LSG1-202ENST00000427461 C1RLQ9NZP8 487 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 EMC3Q9P0I2 261 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 REV1Q9UBZ9 1251 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 C19orf53Q9UNZ5 99 aaPredicted RBP7.84□□□□□ -1.15
LSG1-202ENST00000427461 SLC12A4Q9UP95 1085 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 CHMP2BQ9UQN3 213 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.84□□□□□ -1.15
LSG1-202ENST00000427461 ZKSCAN5Q9Y2L8 839 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 HYDINQ4G0P3 5121 aa7.84□□□□□ -1.15
LSG1-202ENST00000427461 IGHV3OR16-10A0A075B7F0 116 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 CCDC151A5D8V7 595 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 OR6C65A6NJZ3 312 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 CCDC188H7C350 402 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 KIF2AO00139 706 aaPredicted RBP7.83□□□□□ -1.16
LSG1-202ENST00000427461 HOXA3O43365 443 aaPredicted RBP7.83□□□□□ -1.16
LSG1-202ENST00000427461 UGDHO60701 494 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 CDC14BO60729 498 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 SKAP2O75563 359 aaPredicted RBP7.83□□□□□ -1.16
LSG1-202ENST00000427461 SLITRK5O94991 958 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 KCNH1O95259 989 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 IPO7O95373 1038 aaKnown RBP7.83□□□□□ -1.16
LSG1-202ENST00000427461 PSMG1O95456 288 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 IGHV2-5P01817 119 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 JUNP05412 331 aaKnown RBP7.83□□□□□ -1.16
LSG1-202ENST00000427461 PRKCAP17252 672 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 ARL1P40616 181 aaPredicted RBP7.83□□□□□ -1.16
LSG1-202ENST00000427461 ELK3P41970 407 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 ALDH3B1P43353 468 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 SELENBP1Q13228 472 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 GTF2H2Q13888 395 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 MAD2L1BPQ15013 274 aaPredicted RBP7.83□□□□□ -1.16
LSG1-202ENST00000427461 FRG2Q64ET8 278 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 GTF2H2CQ6P1K8 395 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 SYT10Q6XYQ8 523 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 GOLGA7Q7Z5G4 137 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 GAS2L3Q86XJ1 694 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 CCDC103Q8IW40 242 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 PPIL6Q8IXY8 311 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 C1orf52Q8N6N3 182 aaKnown RBP7.83□□□□□ -1.16
LSG1-202ENST00000427461 DEFB108BQ8NET1 73 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 OR4F15Q8NGB8 312 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 GPR151Q8TDV0 419 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 KTI12Q96EK9 354 aaPredicted RBP7.83□□□□□ -1.16
LSG1-202ENST00000427461 ANKRD27Q96NW4 1050 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 FRG2BQ96QU4 278 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 MRPL37Q9BZE1 423 aaKnown RBP7.83□□□□□ -1.16
LSG1-202ENST00000427461 QRSL1Q9H0R6 528 aaKnown RBP7.83□□□□□ -1.16
LSG1-202ENST00000427461 RHOJQ9H4E5 214 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 TCF7L1Q9HCS4 588 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 EQTNQ9NQ60 294 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 SLC35C2Q9NQQ7 365 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 ACOT9Q9Y305 439 aa7.83□□□□□ -1.16
LSG1-202ENST00000427461 DNAH1Q9P2D7 4330 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 A0A087WV62 115 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 VSTM5A8MXK1 200 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 M0R233 179 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 OR7A17O14581 309 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 PIP5K1BO14986 540 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 SYNGR3O43761 229 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 NGFRP08138 427 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 HPGDP15428 266 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 GATA3P23771 443 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 MPGP29372 298 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 TIA1P31483 386 aaKnown RBP eCLIP7.82□□□□□ -1.16
LSG1-202ENST00000427461 TGFBR3Q03167 851 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 COL10A1Q03692 680 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 PDK3Q15120 406 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 TBRG1Q3YBR2 411 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 OXLD1Q5BKU9 147 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 ZNF362Q5T0B9 420 aaPredicted RBP7.82□□□□□ -1.16
LSG1-202ENST00000427461 TTC19Q6DKK2 380 aaPredicted RBP7.82□□□□□ -1.16
LSG1-202ENST00000427461 KRT80Q6KB66 452 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 FIP1L1Q6UN15 594 aaKnown RBP7.82□□□□□ -1.16
LSG1-202ENST00000427461 MTDHQ86UE4 582 aaKnown RBP7.82□□□□□ -1.16
LSG1-202ENST00000427461 RNF214Q8ND24 703 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 STAG3L4Q8TBR4 150 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 PHOSPHO1Q8TCT1 267 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 GPR119Q8TDV5 335 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 POP5Q969H6 163 aaKnown RBP7.82□□□□□ -1.16
LSG1-202ENST00000427461 RAB39BQ96DA2 213 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 UBXN10Q96LJ8 280 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 BBS4Q96RK4 519 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 NAT9Q9BTE0 207 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 MS4A7Q9GZW8 240 aaPredicted RBP7.82□□□□□ -1.16
LSG1-202ENST00000427461 NOL11Q9H8H0 719 aaKnown RBP7.82□□□□□ -1.16
LSG1-202ENST00000427461 MMP26Q9NRE1 261 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 DDX18Q9NVP1 670 aaKnown RBP7.82□□□□□ -1.16
LSG1-202ENST00000427461 OXSMQ9NWU1 459 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 GAR1Q9NY12 217 aaKnown RBP7.82□□□□□ -1.16
LSG1-202ENST00000427461 CARD8Q9Y2G2 431 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 RNF114Q9Y508 228 aa7.82□□□□□ -1.16
LSG1-202ENST00000427461 GPC6Q9Y625 555 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms