RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 FHL1Q13642 323 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 SNAPC1Q16533 368 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 PGGHGQ32M88 737 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 DHRS13Q6UX07 377 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 SLC15A4Q8N697 577 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 TMCO5AQ8N6Q1 288 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 OR5W2Q8NH69 310 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 M1APQ8TC57 530 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 FANK1Q8TC84 345 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 THAP3Q8WTV1 239 aaPredicted RBP13.88□□□□□ -0.19
ACTB-204ENST00000425660 TMCO6Q96DC7 493 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 TMEM43Q9BTV4 400 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 TEX12Q9BXU0 123 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 LHPPQ9H008 270 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 UBQLN3Q9H347 655 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 HHATLQ9HCP6 504 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 MMP25Q9NPA2 562 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 ACOT13Q9NPJ3 140 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 NCDNQ9UBB6 729 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 RSL24D1Q9UHA3 163 aaKnown RBP13.88□□□□□ -0.19
ACTB-204ENST00000425660 HEATR5AQ86XA9 2040 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 IGKV1D-42A0A075B6H8 117 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 ENO4A6NNW6 628 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 EFCAB9A8MZ26 197 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 BHLHE40O14503 412 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 FOXD2O60548 495 aaPredicted RBP13.87□□□□□ -0.19
ACTB-204ENST00000425660 SAGP10523 405 aaPredicted RBP13.87□□□□□ -0.19
ACTB-204ENST00000425660 FUT1P19526 365 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 C21orf33P30042 268 aaPredicted RBP13.87□□□□□ -0.19
ACTB-204ENST00000425660 P2RX1P51575 399 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 CCR4P51679 360 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 FBXW4P57775 412 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 TBCEQ15813 527 aaPredicted RBP13.87□□□□□ -0.19
ACTB-204ENST00000425660 BTBD16Q32M84 506 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 HES3Q5TGS1 186 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 SMARCD3Q6STE5 483 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 NUP54Q7Z3B4 507 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 ALDH16A1Q8IZ83 802 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 LNX2Q8N448 690 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 OR11G2Q8NGC1 345 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 ZNF420Q8TAQ5 688 aaPredicted RBP13.87□□□□□ -0.19
ACTB-204ENST00000425660 NACC2Q96BF6 587 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 LRR1Q96L50 414 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 SAMD8Q96LT4 415 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 KLHDC3Q9BQ90 382 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 DEFB126Q9BYW3 111 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 TCFL5Q9UL49 500 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 RPL36Q9Y3U8 105 aaKnown RBP13.87□□□□□ -0.19
ACTB-204ENST00000425660 SOCS6O14544 535 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 HCN1O60741 890 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 HMGN1P05114 100 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 FBXO45P0C2W1 286 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 BMP7P18075 431 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 PGCP20142 388 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 DCKP27707 260 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 ST3GAL4Q11206 333 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 CBFBQ13951 182 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 SYT6Q5T7P8 510 aaPredicted RBP13.87□□□□□ -0.19
ACTB-204ENST00000425660 TMEM164Q5U3C3 297 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 LSRQ86X29 649 aaPredicted RBP13.87□□□□□ -0.19
ACTB-204ENST00000425660 OR52L1Q8NGH7 329 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 OR13C2Q8NGS9 318 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 SLC22A8Q8TCC7 542 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 LIPHQ8WWY8 451 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 SH3YL1Q96HL8 342 aaPredicted RBP13.87□□□□□ -0.19
ACTB-204ENST00000425660 DOK1Q99704 481 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 CDCA4Q9BXL8 241 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 DNAJC27Q9NZQ0 273 aa13.87□□□□□ -0.19
ACTB-204ENST00000425660 ELOA3DA6NLF2 546 aaPredicted RBP13.86□□□□□ -0.19
ACTB-204ENST00000425660 ZNF99A8MXY4 864 aaPredicted RBP13.86□□□□□ -0.19
ACTB-204ENST00000425660 CDC40O60508 579 aaKnown RBP eCLIP13.86□□□□□ -0.199e-7■■■□□ 18.5
ACTB-204ENST00000425660 OR2J2O76002 312 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 INMTO95050 263 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 DBTP11182 482 aaKnown RBP13.86□□□□□ -0.19
ACTB-204ENST00000425660 TCN2P20062 427 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 SLC9A3P48764 834 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 GAS1P54826 345 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 GP2P55259 537 aaKnown RBP13.86□□□□□ -0.19
ACTB-204ENST00000425660 IRF3Q14653 427 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 ELOA3BQ3SY89 546 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 STPG1Q5TH74 334 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 UBE2UQ5VVX9 321 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 NDUFAF7Q7L592 441 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 OAFQ86UD1 273 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 ARMC10Q8N2F6 343 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 ELOA3Q8NG57 546 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 ZNF563Q8TA94 476 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 CT55Q8WUE5 264 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 FCGR1BQ92637 280 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 RORBQ92753 470 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 ZNF582Q96NG8 517 aaPredicted RBP13.86□□□□□ -0.19
ACTB-204ENST00000425660 RASL10BQ96S79 203 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 FAM117AQ9C073 453 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 B3GNT4Q9C0J1 378 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 ENKD1Q9H0I2 346 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 RYDENQ9NUL5 291 aaKnown RBP13.86□□□□□ -0.19
ACTB-204ENST00000425660 MRPS18AQ9NVS2 196 aaKnown RBP13.86□□□□□ -0.19
ACTB-204ENST00000425660 IL20RAQ9UHF4 553 aa13.86□□□□□ -0.19
ACTB-204ENST00000425660 CCDC160A6NGH7 325 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 C17orf51A8MQB3 221 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms