RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 FHL1Q13642 323 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 EXOSC2Q13868 293 aaKnown RBP13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 Q6ZTK2 550 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 SERPINA12Q8IW75 414 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 SDR9C7Q8NEX9 313 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 CNOT9Q92600 299 aaKnown RBP13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 SORCS2Q96PQ0 1159 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 DHRS9Q9BPW9 319 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 ZNF559Q9BR84 538 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 C1QTNF6Q9BXI9 259 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 ZNF350Q9GZX5 532 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 DLL4Q9NR61 685 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 ANKRD10Q9NXR5 420 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 FLRT3Q9NZU0 649 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 NUBP2Q9Y5Y2 271 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 DUXAA6NLW8 204 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 RPS11P62280 158 aaKnown RBP eCLIP13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 TNFRSF17Q02223 184 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 ZSWIM7Q19AV6 140 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 DCST2Q5T1A1 773 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 FAAP20Q6NZ36 180 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 FBXO42Q6P3S6 717 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 RANBP3LQ86VV4 465 aaPredicted RBP13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 CCL4L1Q8NHW4 92 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 LGALS14Q8TCE9 139 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 SMARCD2Q92925 531 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 PELI1Q96FA3 418 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 TBC1D29Q9UFV1 150 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 ARHGEF17Q96PE2 2063 aaPredicted RBP13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 TBC1D3KA0A087X1G2 549 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 LINC00862A6NCI5 91 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 TBC1D3FA6NER0 549 aaPredicted RBP13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 TRABD2BA6NFA1 517 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 LRRC72A6NJI9 287 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 SLC22A31A6NKX4 558 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 I3L521 148 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 GNRH1P01148 92 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 CT62P0C5K7 136 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 H2AFB2P0C5Z0 115 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 CLDN12P56749 244 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 HTRA4P83105 476 aaPredicted RBP13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 RGS1Q08116 209 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 CST6Q15828 149 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 CD276Q5ZPR3 534 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 TBC1D3GQ6DHY5 549 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 PAQR7Q86WK9 346 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 ZNF614Q8N883 585 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 OR4K14Q8NGD5 310 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 OR5T3Q8NGG3 340 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 OR4K13Q8NH42 304 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 GFI1Q99684 422 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 FKRPQ9H9S5 495 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 FGF22Q9HCT0 170 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 EML5Q05BV3 1969 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 FAM86C2PA6NEL3 165 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 PRR19A6NJB7 356 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 C4orf47A7E2U8 309 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 LAMP2P13473 410 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 KLF9Q13886 244 aaPredicted RBP13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 PSRC1Q6PGN9 363 aaPredicted RBP13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 RAB7BQ96AH8 199 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 GPR174Q9BXC1 333 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 SLC25A18Q9H1K4 315 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 NTMQ9P121 344 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 ZNF346Q9UL40 294 aaKnown RBP13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 CA5BQ9Y2D0 317 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 SLC35A3Q9Y2D2 325 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 F5P12259 2224 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 CACNA1CQ13936 2221 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 SHOXO15266 292 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 PTP4A3O75365 173 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 TIMP1P01033 207 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 PDGFAP04085 211 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 SULT1A3P0DMM9 295 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 SULT1A4P0DMN0 295 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 NID1P14543 1247 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 DNASE1P24855 282 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 CMPK1P30085 196 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 IGFALSP35858 605 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 MMP15P51511 669 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 TPRA1Q86W33 373 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 CMTM4Q8IZR5 234 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 ZNF619Q8N2I2 560 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 RBP7Q96R05 134 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 OR2M2Q96R28 347 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 CFHR5Q9BXR6 569 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 RANBP3Q9H6Z4 567 aaPredicted RBP13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 TRPV4Q9HBA0 871 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 OR6C2Q9NZP2 312 aa13.09□□□□□ -0.31
TPM3P9-201ENST00000424846 CACNA1IQ9P0X4 2223 aa13.08□□□□□ -0.31
TPM3P9-201ENST00000424846 SSNA1O43805 119 aa13.08□□□□□ -0.32
TPM3P9-201ENST00000424846 FGF17O60258 216 aa13.08□□□□□ -0.32
TPM3P9-201ENST00000424846 UBL3O95164 117 aa13.08□□□□□ -0.32
TPM3P9-201ENST00000424846 RPS4Y1P22090 263 aaKnown RBP13.08□□□□□ -0.32
TPM3P9-201ENST00000424846 BMP8BP34820 402 aa13.08□□□□□ -0.32
TPM3P9-201ENST00000424846 GDNFP39905 211 aa13.08□□□□□ -0.32
TPM3P9-201ENST00000424846 GDI2P50395 445 aaKnown RBP13.08□□□□□ -0.32
TPM3P9-201ENST00000424846 AP2S1P53680 142 aaPredicted RBP13.08□□□□□ -0.32
TPM3P9-201ENST00000424846 NRG3P56975 720 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms