RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 RNF14Q9UBS8 474 aa2.41□□□□□ -2.02
LINC00397-201ENST00000422074 CHRNA9Q9UGM1 479 aa2.41□□□□□ -2.02
LINC00397-201ENST00000422074 BLOC1S6Q9UL45 172 aa2.41□□□□□ -2.02
LINC00397-201ENST00000422074 UBQLN1Q9UMX0 589 aaKnown RBP2.41□□□□□ -2.02
LINC00397-201ENST00000422074 NPIPA1Q9UND3 350 aa2.41□□□□□ -2.02
LINC00397-201ENST00000422074 RPH3ALQ9UNE2 315 aa2.41□□□□□ -2.02
LINC00397-201ENST00000422074 NEU3Q9UQ49 428 aa2.41□□□□□ -2.02
LINC00397-201ENST00000422074 IFT52Q9Y366 437 aa2.41□□□□□ -2.02
LINC00397-201ENST00000422074 IGHV7-81A0A0B4J1V7 117 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 IGHV2-70DA0A0C4DH43 119 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 ESYT2A0FGR8 921 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 TUBAL3A6NHL2 446 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 K7ENP7 123 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 XPO1O14980 1071 aaKnown RBP2.4□□□□□ -2.03
LINC00397-201ENST00000422074 ANGPT2O15123 496 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 ZNF264O43296 627 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 ZSCAN12O43309 604 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 GMFGO60234 142 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 ECI2O75521 394 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 BBOX1O75936 387 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 GNA14O95837 355 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 CA1P00915 261 aaPredicted RBP2.4□□□□□ -2.03
LINC00397-201ENST00000422074 KRT8P05787 483 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 HPNP05981 417 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 H2BFMP0C1H6 154 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 CCDC130P13994 396 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 IGLL1P15814 213 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 GCFC2P16383 781 aaKnown RBP2.4□□□□□ -2.03
LINC00397-201ENST00000422074 TPSB2P20231 275 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 NT5EP21589 574 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 YWHABP31946 246 aaKnown RBP2.4□□□□□ -2.03
LINC00397-201ENST00000422074 PRPHP41219 470 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 IFNAR2P48551 515 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 RGS4P49798 205 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 CBX1P83916 185 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 ZNF45Q02386 682 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 CCDC173Q0VFZ6 552 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 EBI3Q14213 229 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 MESDQ14696 234 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 TPSAB1Q15661 275 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 TRIM16LQ309B1 348 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 EOGTQ5NDL2 527 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 SLC25A24Q6NUK1 477 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 CXCL17Q6UXB2 119 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 CLDN19Q8N6F1 224 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 TMEM252Q8N6L7 170 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 KIR3DL3Q8N743 410 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 ZNF433Q8N7K0 673 aaPredicted RBP2.4□□□□□ -2.03
LINC00397-201ENST00000422074 FBXO30Q8TB52 745 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 TRMT10AQ8TBZ6 339 aaKnown RBP2.4□□□□□ -2.03
LINC00397-201ENST00000422074 RAPGEF5Q92565 580 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 RPL3LQ92901 407 aaKnown RBP2.4□□□□□ -2.03
LINC00397-201ENST00000422074 RAB7BQ96AH8 199 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 CELF6Q96J87 481 aaKnown RBP2.4□□□□□ -2.03
LINC00397-201ENST00000422074 TUBGCP2Q9BSJ2 902 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 EDEM2Q9BV94 578 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 SMYD3Q9H7B4 428 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 MEAF6Q9HAF1 191 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 WARS2Q9UGM6 360 aaKnown RBP2.4□□□□□ -2.03
LINC00397-201ENST00000422074 TBK1Q9UHD2 729 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 DCDC2Q9UHG0 476 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 SCML2Q9UQR0 700 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 DDX49Q9Y6V7 483 aaKnown RBP2.4□□□□□ -2.03
LINC00397-201ENST00000422074 TTC21BQ7Z4L5 1316 aa2.4□□□□□ -2.03
LINC00397-201ENST00000422074 KDRP35968 1356 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 PP2D1A8MPX8 630 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 TCP11X1B4DZS4 312 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 G3V4G9 280 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 RS1O15537 224 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 MMP23AO75900 390 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 NEBLO76041 1014 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 RHOBTB1O94844 696 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 HSMCR30P0CW71 290 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 POLR2EP19388 210 aaKnown RBP2.39□□□□□ -2.03
LINC00397-201ENST00000422074 UQCRC2P22695 453 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 NMT1P30419 496 aaKnown RBP2.39□□□□□ -2.03
LINC00397-201ENST00000422074 CA8P35219 290 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 RBMXP38159 391 aaKnown RBP2.39□□□□□ -2.03
LINC00397-201ENST00000422074 TIGITQ495A1 244 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 GGTA1PQ4G0N0 100 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 TFDP3Q5H9I0 405 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 CFAP157Q5JU67 520 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 ATAD3BQ5T9A4 648 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 FAM71F2Q6NXP2 309 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 FAM199XQ6PEV8 388 aaPredicted RBP2.39□□□□□ -2.03
LINC00397-201ENST00000422074 WDR74Q6RFH5 385 aaPredicted RBP2.39□□□□□ -2.03
LINC00397-201ENST00000422074 CES3Q6UWW8 571 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 MOB3BQ86TA1 216 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 CCDC65Q8IXS2 484 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 DHRSXQ8N5I4 330 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 SYT14Q8NB59 555 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 OR2AP1Q8NGE2 309 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 OR2T34Q8NGX1 318 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 MRPS31Q92665 395 aaKnown RBP2.39□□□□□ -2.03
LINC00397-201ENST00000422074 OSTF1Q92882 214 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 SRXN1Q9BYN0 137 aa2.39□□□□□ -2.03
LINC00397-201ENST00000422074 POLR2J2Q9GZM3 115 aaKnown RBP2.39□□□□□ -2.03
LINC00397-201ENST00000422074 POLR2J3Q9H1A7 115 aaKnown RBP2.39□□□□□ -2.03
LINC00397-201ENST00000422074 NARFLQ9H6Q4 476 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms