RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 WDR60Q8WVS4 1066 aa14.68□□□□□ -0.06
LINC00404-201ENST00000418660 GTF2H4Q92759 462 aa14.68□□□□□ -0.06
LINC00404-201ENST00000418660 OR5B2Q96R09 309 aa14.68□□□□□ -0.06
LINC00404-201ENST00000418660 CCDC106Q9BWC9 280 aa14.68□□□□□ -0.06
LINC00404-201ENST00000418660 CXXC4Q9H2H0 198 aa14.68□□□□□ -0.06
LINC00404-201ENST00000418660 C12orf49Q9H741 205 aa14.68□□□□□ -0.06
LINC00404-201ENST00000418660 CTPS2Q9NRF8 586 aa14.68□□□□□ -0.06
LINC00404-201ENST00000418660 CALML5Q9NZT1 146 aa14.68□□□□□ -0.06
LINC00404-201ENST00000418660 SPG11Q96JI7 2443 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 IGHV3-15A0A0B4J1V0 119 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 DEFB108AA8MXU0 73 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 RAF1P04049 648 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 YES1P07947 543 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 TFPTP0C1Z6 253 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 PPP3CBP16298 524 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 FKBP2P26885 142 aaKnown RBP14.67□□□□□ -0.06
LINC00404-201ENST00000418660 IDH2P48735 452 aaKnown RBP14.67□□□□□ -0.06
LINC00404-201ENST00000418660 AQP5P55064 265 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 DSTNP60981 165 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 GTDC1Q4AE62 458 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 SYT14P1Q58G82 188 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 ANKRD34AQ69YU3 496 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 STAC2Q6ZMT1 411 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 TMPPEQ6ZT21 453 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 NUFIP2Q7Z417 695 aaKnown RBP14.67□□□□□ -0.06
LINC00404-201ENST00000418660 MBD6Q96DN6 1003 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 AURKBQ96GD4 344 aaPredicted RBP14.67□□□□□ -0.06
LINC00404-201ENST00000418660 EBF4Q9BQW3 602 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 PAIP1Q9H074 479 aaKnown RBP14.67□□□□□ -0.06
LINC00404-201ENST00000418660 BCO1Q9HAY6 547 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 THUMPD1Q9NXG2 353 aaKnown RBP14.67□□□□□ -0.06
LINC00404-201ENST00000418660 C6orf203Q9P0P8 240 aaPredicted RBP14.67□□□□□ -0.06
LINC00404-201ENST00000418660 KLHL9Q9P2J3 617 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 CHRNA9Q9UGM1 479 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 GPR52Q9Y2T5 361 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 MPDZO75970 2070 aa14.67□□□□□ -0.06
LINC00404-201ENST00000418660 A0A1W2PPR1 153 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 SULT2B1O00204 365 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 FAAHO00519 579 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 AP3D1O14617 1153 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 SMAD9O15198 467 aaKnown RBP14.66□□□□□ -0.06
LINC00404-201ENST00000418660 SIAH2O43255 324 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 CYTIPO60759 359 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 ADAM11O75078 769 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 TFPIP10646 304 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 HTR3AP46098 478 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 CLK1P49759 484 aaKnown RBP14.66□□□□□ -0.06
LINC00404-201ENST00000418660 DIO1P49895 249 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 CRISP3P54108 245 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 CSNK2A1P68400 391 aaPredicted RBP14.66□□□□□ -0.06
LINC00404-201ENST00000418660 IRX1P78414 480 aaPredicted RBP14.66□□□□□ -0.06
LINC00404-201ENST00000418660 MRPL2Q5T653 305 aaKnown RBP14.66□□□□□ -0.06
LINC00404-201ENST00000418660 SLC2A7Q6PXP3 512 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 BLOC1S3Q6QNY0 202 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 C22orf34Q6ZV56 151 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 ADGRG3Q86Y34 549 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 FUNDC1Q8IVP5 155 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 OR52P1PQ8NH57 321 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 SLC38A5Q8WUX1 472 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 CKAP2Q8WWK9 683 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 ZC3HAV1LQ96H79 300 aaKnown RBP14.66□□□□□ -0.06
LINC00404-201ENST00000418660 PSD2Q9BQI7 771 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 OR10A4Q9H209 315 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 PRDM4Q9UKN5 801 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 PCDHB14Q9Y5E9 798 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 HEATR5AQ86XA9 2040 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 DSPPQ9NZW4 1301 aa14.66□□□□□ -0.06
LINC00404-201ENST00000418660 A0A096LPI6 279 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 TMEM247A6NEH6 219 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 CLIC1O00299 241 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 ATE1O95260 518 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 BCHEP06276 602 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 PSMB1P20618 241 aaKnown RBP14.65□□□□□ -0.06
LINC00404-201ENST00000418660 RASGEF1BQ0VAM2 473 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 KEAP1Q14145 624 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 TFAP2EQ6VUC0 442 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 MTDHQ86UE4 582 aaKnown RBP14.65□□□□□ -0.06
LINC00404-201ENST00000418660 ZNF440Q8IYI8 595 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 PIK3IP1Q96FE7 263 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 MAGEB18Q96M61 343 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 HDHD5Q9BXW7 423 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 RAD21L1Q9H4I0 556 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 TMEM45AQ9NWC5 275 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 ING1Q9UK53 422 aaPredicted RBP14.65□□□□□ -0.06
LINC00404-201ENST00000418660 HDGFL3Q9Y3E1 203 aa14.65□□□□□ -0.06
LINC00404-201ENST00000418660 TMED7-TICAM2A0A0A6YYA0 188 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 A0A0G2JPF8 293 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 CFAP73A6NFT4 308 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 ZNF724A8MTY0 619 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 HNRNPCL2B2RXH8 293 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 HNRNPCL3B7ZW38 293 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 HNRNPCL1O60812 293 aaKnown RBP14.64□□□□□ -0.07
LINC00404-201ENST00000418660 PMS2P2O95744 297 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 THBDP07204 575 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 FESP07332 822 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 HNRNPCL4P0DMR1 293 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 UQCRBP14927 111 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 HOXB9P17482 250 aaPredicted RBP14.64□□□□□ -0.07
LINC00404-201ENST00000418660 KLK2P20151 261 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 SLC1A3P43003 542 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms