RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 SLC1A3P43003 542 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 SRSF1Q07955 248 aaKnown RBP eCLIP6.97□□□□□ -1.292e-54■■■□□ 17.5
RBM39-209ENST00000416529 EPS8Q12929 822 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 SELENBP1Q13228 472 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 SKP2Q13309 424 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 RAPSNQ13702 412 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 CAPRIN1Q14444 709 aaKnown RBP6.97□□□□□ -1.29
RBM39-209ENST00000416529 INPP5JQ15735 1006 aaPredicted RBP6.97□□□□□ -1.29
RBM39-209ENST00000416529 NNATQ16517 81 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 TMEM44Q2T9K0 475 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 ANKDD1AQ495B1 522 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 PDZK1Q5T2W1 519 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 C1QTNF12Q5T7M4 302 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 GLYATQ6IB77 296 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 WBP2NLQ6ICG8 309 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 LCN8Q6JVE9 175 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 Q6ZPB1 254 aaPredicted RBP6.97□□□□□ -1.29
RBM39-209ENST00000416529 TRILQ7L0X0 811 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.97□□□□□ -1.29
RBM39-209ENST00000416529 CYP4Z1Q86W10 505 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 SIAH3Q8IW03 269 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 PRR22Q8IZ63 422 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 LINC00471Q8N535 108 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 Q8NA96 180 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 CATSPER1Q8NEC5 780 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 OR2M3Q8NG83 312 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 NFKBIDQ8NI38 313 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 PNPT1Q8TCS8 783 aaKnown RBP6.97□□□□□ -1.29
RBM39-209ENST00000416529 GEMIN6Q8WXD5 167 aaKnown RBP6.97□□□□□ -1.29
RBM39-209ENST00000416529 NSMCE2Q96MF7 247 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 HS6ST2Q96MM7 605 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 ZFP3Q96NJ6 502 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 FANCD2OSQ96PS1 177 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 RAB3IPQ96QF0 476 aaPredicted RBP6.97□□□□□ -1.29
RBM39-209ENST00000416529 TACO1Q9BSH4 297 aaKnown RBP6.97□□□□□ -1.29
RBM39-209ENST00000416529 UGT2B28Q9BY64 529 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 KRTAP9-9Q9BYP9 154 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 KRTAP9-4Q9BYQ2 154 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 TMEM27Q9HBJ8 222 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 GP6Q9HCN6 339 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 TIGARQ9NQ88 270 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 ZNF71Q9NQZ8 489 aaPredicted RBP6.97□□□□□ -1.29
RBM39-209ENST00000416529 ACER3Q9NUN7 267 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 DCAF13Q9NV06 445 aaKnown RBP6.97□□□□□ -1.29
RBM39-209ENST00000416529 TUBA8Q9NY65 449 aaPredicted RBP6.97□□□□□ -1.29
RBM39-209ENST00000416529 TAS2R10Q9NYW0 307 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 SELENONQ9NZV5 590 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 FLNCQ14315 2725 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 ATMQ13315 3056 aa6.97□□□□□ -1.29
RBM39-209ENST00000416529 DOPEY1Q5JWR5 2465 aa6.96□□□□□ -1.29
RBM39-209ENST00000416529 TRGV5A0A0B4J1U4 118 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 LRRC3CA6NJW4 275 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 AP3D1O14617 1153 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 ADAM10O14672 748 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 OR2T1O43869 369 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 BCAS1O75363 584 aaPredicted RBP6.96□□□□□ -1.3
RBM39-209ENST00000416529 NTN1O95631 604 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 GPIP06744 558 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 FREM3P0C091 2139 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 FCGR2AP12318 317 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 GDF1P27539 372 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 PTGER1P34995 402 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 RBM34P42696 430 aaKnown RBP6.96□□□□□ -1.3
RBM39-209ENST00000416529 RFX3P48380 749 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 PCYT1AP49585 367 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 RPS3AP61247 264 aaKnown RBP6.96□□□□□ -1.3
RBM39-209ENST00000416529 NCALDP61601 193 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 CBX1P83916 185 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 SLC25A3Q00325 362 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 MERTKQ12866 999 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 NRF1Q16656 503 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 NADK2Q4G0N4 442 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 IFI44LQ53G44 452 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 CCNJQ5T5M9 372 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 MRPL2Q5T653 305 aaKnown RBP6.96□□□□□ -1.3
RBM39-209ENST00000416529 GTF2IRD2BQ6EKJ0 949 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 VASNQ6EMK4 673 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 TMEM211Q6ICI0 200 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 ULK3Q6PHR2 472 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 C16orf47Q6ZP98 133 aaPredicted RBP6.96□□□□□ -1.3
RBM39-209ENST00000416529 ESPNLQ6ZVH7 1005 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 ASRGL1Q7L266 308 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 MAMDC2Q7Z304 686 aaPredicted RBP6.96□□□□□ -1.3
RBM39-209ENST00000416529 PIWIL3Q7Z3Z3 882 aaKnown RBP6.96□□□□□ -1.3
RBM39-209ENST00000416529 MARCH3Q86UD3 253 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 GTF2IRD2Q86UP8 949 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 IFNEQ86WN2 208 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 DHFR2Q86XF0 187 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 TMEM251Q8N6I4 163 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 NEIL3Q8TAT5 605 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 CPT1CQ8TCG5 803 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 ZPLD1Q8TCW7 415 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 STK35Q8TDR2 534 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 GPR119Q8TDV5 335 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 SLC7A6OSQ96CW6 309 aaPredicted RBP6.96□□□□□ -1.3
RBM39-209ENST00000416529 SNRNP40Q96DI7 357 aaKnown RBP6.96□□□□□ -1.3
RBM39-209ENST00000416529 SLC47A1Q96FL8 570 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 LRGUKQ96M69 825 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 ZNF347Q96SE7 839 aa6.96□□□□□ -1.3
RBM39-209ENST00000416529 EPYCQ99645 322 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms