RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 CRLF1O75462 422 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 ERLIN1O75477 346 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 ECI2O75521 394 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 CABYRO75952 493 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 CCDC166P0CW27 439 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 RNH1P13489 461 aaKnown RBP3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 GDF1P27539 372 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 CCR1P32246 355 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 SSR1P43307 286 aaKnown RBP3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 BEX3Q00994 111 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 PRAMEF5Q5TYX0 476 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 PRAMEF6Q5VXH4 476 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 UTS2BQ765I0 119 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 RUFY3Q7L099 469 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 TRPM8Q7Z2W7 1104 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 NRMQ8IXM6 262 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 CADM2Q8N3J6 435 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 PAQR8Q8TEZ7 354 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 MRPS31Q92665 395 aaKnown RBP3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 CCDC77Q9BR77 488 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 PARD6BQ9BYG5 372 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 SMYD3Q9H7B4 428 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 VPS37BQ9H9H4 285 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 OR1A1Q9P1Q5 309 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 PHF11Q9UIL8 331 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 ERVW-1Q9UQF0 538 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 PLLPQ9Y342 182 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 IFT52Q9Y366 437 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 POGZQ7Z3K3 1410 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 A0A1B0GUS0 222 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 GOLGA8OA6NCC3 632 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 ZNF705EA8MWA4 302 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 TRDCB7Z8K6 153 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 GOLGA8NF8WBI6 632 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 GOLGA8SH3BPF8 625 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 SGK1O00141 431 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 RAMP3O60896 148 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 SLC2A3P11169 496 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 TPMTP51580 245 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 CDH4P55283 916 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 BCL2L1Q07817 233 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 SLC10A7Q0GE19 358 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 KLRB1Q12918 225 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 CUL2Q13617 745 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 SLC15A2Q16348 729 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 MARC1Q5VT66 337 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 GTSCR1Q86UQ5 136 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 FAM228AQ86W67 206 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 TGIF2LXQ8IUE1 241 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 OR2L13Q8N349 312 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 ALLCQ8N6M5 410 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 OR9K2Q8NGE7 335 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 OR2A12Q8NGT7 310 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 UBE2E3Q969T4 207 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 CXorf40BQ96DE9 158 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 MTMR9Q96QG7 549 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 PLIN2Q99541 437 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 MCHR1Q99705 422 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 TRIM62Q9BVG3 475 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 RAB34Q9BZG1 259 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 B3GNT2Q9NY97 397 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 BFARQ9NZS9 450 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 NPTNQ9Y639 398 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 ATP10AO60312 1499 aa3.65□□□□□ -1.83
HMGB3P31-201ENST00000413333 SNED1Q8TER0 1413 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 IGHV3-35A0A0C4DH35 117 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 K7ENP7 123 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 CDX4O14627 284 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 GAS8-AS1O95177 125 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 OR8U8P0C7N1 319 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 NMT1P30419 496 aaKnown RBP3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 MDH2P40926 338 aaKnown RBP3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 MAP3K8P41279 467 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 EPS15P42566 896 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 DUSP3P51452 185 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 SSX2Q16385 188 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 LPAL2Q16609 132 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 Q1RN00 199 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 GSG1Q2KHT4 349 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 KLHL38Q2WGJ6 581 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 TCTEX1D4Q5JR98 221 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 CTSL3PQ5NE16 218 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 KDM7AQ6ZMT4 941 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 CATSPER1Q8NEC5 780 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 OR56B4Q8NH76 319 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 FAM222BQ8WU58 562 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 GTSF1Q8WW33 167 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 HAVCR1Q96D42 359 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 TBX15Q96SF7 602 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 RNF2Q99496 336 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 FMO2Q99518 471 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 ZNF670Q9BS34 389 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 CHRDL1Q9BU40 450 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 NMUR2Q9GZQ4 415 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 YY1AP1Q9H869 796 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 NUDT15Q9NV35 164 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 ZNF639Q9UID6 485 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 COPS3Q9UNS2 423 aa3.64□□□□□ -1.83
HMGB3P31-201ENST00000413333 A0A0U1RQS6 177 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 IQANK1A0A1B0GTG1 560 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms