RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 WWTR1Q9GZV5 400 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 MCCC2Q9HCC0 563 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 ISYNA1Q9NPH2 558 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 TNFRSF10DQ9UBN6 386 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 SPIN1Q9Y657 262 aaPredicted RBP22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 METTL15A6NJ78 407 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 PRR23D1E9PI22 279 aaPredicted RBP22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 ZNF264O43296 627 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 OIP5O43482 229 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 PPP1R3DO95685 299 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 LIMS3P0CW19 117 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 LIMS4P0CW20 117 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 PRR23D2P0DMB1 279 aaPredicted RBP22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 CPEP16870 476 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 HK1P19367 917 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 SLC1A3P43003 542 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 PEAR1Q5VY43 1037 aaPredicted RBP22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 NIPAL3Q6P499 406 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 PSD4Q8NDX1 1056 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 HSPBAP1Q96EW2 488 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 CCNL2Q96S94 520 aaPredicted RBP22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 SSR3Q9UNL2 185 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 CDC14CA4D256 554 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 ELOA3DA6NLF2 546 aaPredicted RBP22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 WWP2O00308 870 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 ICOSLGO75144 302 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 SCRG1O75711 98 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 CALRP27797 417 aaKnown RBP22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 ELOA3BQ3SY89 546 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 NKAIN1Q4KMZ8 207 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 APOOLQ6UXV4 268 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 ELOA3Q8NG57 546 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 OR2I1PQ8NGU4 316 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 DACH2Q96NX9 599 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 A3GALT2U3KPV4 340 aa22.61■■□□□ 1.21
DNMT3A-206ENST00000406659 TO15178 435 aa22.6■■□□□ 1.21
DNMT3A-206ENST00000406659 HEXBP07686 556 aa22.6■■□□□ 1.21
DNMT3A-206ENST00000406659 PNMTP11086 282 aa22.6■■□□□ 1.21
DNMT3A-206ENST00000406659 PAICSP22234 425 aaKnown RBP22.6■■□□□ 1.21
DNMT3A-206ENST00000406659 NOS3P29474 1203 aa22.6■■□□□ 1.21
DNMT3A-206ENST00000406659 IDUAP35475 653 aa22.6■■□□□ 1.21
DNMT3A-206ENST00000406659 CRYBB2P43320 205 aa22.6■■□□□ 1.21
DNMT3A-206ENST00000406659 PLCXD2Q0VAA5 305 aa22.6■■□□□ 1.21
DNMT3A-206ENST00000406659 COL5A1P20908 1838 aaPredicted RBP22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 NDUFB2O95178 105 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 IFNGP01579 166 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 IGHA1P01876 353 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 PEPDP12955 493 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 ZNF3P17036 446 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 SOX6P35712 828 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 SLC9A3P48764 834 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 ITGADQ13349 1161 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 FHL1Q13642 323 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 INAQ16352 499 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 KLHL12Q53G59 568 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 ARMC4Q5T2S8 1044 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 FCRLBQ6BAA4 426 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 PWWP2BQ6NUJ5 590 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 IGFN1Q86VF2 1251 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 KLHL36Q8N4N3 616 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 SLC38A9Q8NBW4 561 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 SLC37A3Q8NCC5 494 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 CEP76Q8TAP6 659 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 IFI44Q8TCB0 444 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 ZC3H10Q96K80 434 aaKnown RBP22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 SECISBP2Q96T21 854 aaKnown RBP22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 SLC19A3Q9BZV2 496 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 LAT2Q9GZY6 243 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 FER1L5A0AVI2 2057 aa22.59■■□□□ 1.21
DNMT3A-206ENST00000406659 IGLV3-12A0A075B6K2 115 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 PATE3B3GLJ2 98 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 TSPAN2O60636 221 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 TIAF1O95411 115 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 BMP4P12644 408 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 DAB2P98082 770 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 ARHGAP11AQ6P4F7 1023 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 CBLN3Q6UW01 205 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 OR51G2Q8NGK0 314 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 FNDC8Q8TC99 324 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 PTP4A1Q93096 173 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 ERVK13-1Q9NX77 482 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 B3GNT3Q9Y2A9 372 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 HEATR5AQ86XA9 2040 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 ADAMTS9Q9P2N4 1935 aa22.58■■□□□ 1.21
DNMT3A-206ENST00000406659 OR7A10O76100 309 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 CER1O95813 267 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 HOXD12P35452 270 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 DCDP81605 110 aaKnown RBP22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 TMED1Q13445 227 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 TPBGQ13641 420 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 DESI1Q6ICB0 168 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 MFSD4AQ8N468 514 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 OR5M3Q8NGP4 307 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 UFD1Q92890 307 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 OMA1Q96E52 524 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 ERMAPQ96PL5 475 aaPredicted RBP22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 ARHGAP9Q9BRR9 750 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 CDADC1Q9BWV3 514 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 JAM3Q9BX67 310 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 HCAR1Q9BXC0 346 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms