RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 DNAJC14Q6Y2X3 702 aaPredicted RBP13.65□□□□□ -0.22
TPM1-207ENST00000403994 LRRC75A-AS1Q8N1F1 130 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 TRIML2Q8N7C3 387 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 STEAP2Q8NFT2 490 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 RAB3IL1Q8TBN0 382 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 ARL8AQ96BM9 186 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 TLCD1Q96CP7 247 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 ZG16BQ96DA0 208 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 PLPPR2Q96GM1 343 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 TRNT1Q96Q11 434 aaKnown RBP13.65□□□□□ -0.22
TPM1-207ENST00000403994 OR52E6Q96RD3 313 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 CCDC106Q9BWC9 280 aa13.65□□□□□ -0.22
TPM1-207ENST00000403994 GSX1Q9H4S2 264 aaPredicted RBP13.65□□□□□ -0.22
TPM1-207ENST00000403994 EXOSC3Q9NQT5 275 aaKnown RBP13.65□□□□□ -0.22
TPM1-207ENST00000403994 ADAM11O75078 769 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 RPS4Y1P22090 263 aaKnown RBP13.64□□□□□ -0.23
TPM1-207ENST00000403994 EDNRAP25101 427 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 SLC18A1P54219 525 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 CHRNEQ04844 493 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 LRRC74AQ0VAA2 488 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 RASGEF1BQ0VAM2 473 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 SYPL1Q16563 259 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 COX20Q5RI15 118 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 ATG16L1Q676U5 607 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 MAVSQ7Z434 540 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 ANKFN1Q8N957 763 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 PNPT1Q8TCS8 783 aaKnown RBP13.64□□□□□ -0.23
TPM1-207ENST00000403994 IGFBPL1Q8WX77 278 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 POM121Q96HA1 1249 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 MAELQ96JY0 434 aaKnown RBP13.64□□□□□ -0.23
TPM1-207ENST00000403994 ZNF300Q96RE9 604 aaPredicted RBP13.64□□□□□ -0.23
TPM1-207ENST00000403994 ZBTB18Q99592 522 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 TMEM204Q9BSN7 226 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 SLC38A1Q9H2H9 487 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 CTPS2Q9NRF8 586 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 SERINC1Q9NRX5 453 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 NKIRAS1Q9NYS0 192 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 CHRNA9Q9UGM1 479 aa13.64□□□□□ -0.23
TPM1-207ENST00000403994 CADP27708 2225 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 USF3Q68DE3 2245 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 AGAP5A6NIR3 686 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 ZNF814B7Z6K7 855 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 ARHGEF9O43307 516 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 PLAUP00749 431 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 GSNP06396 782 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 IDO1P14902 403 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 IL32P24001 234 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 RYKP34925 604 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 APOBEC1P41238 236 aaKnown RBP13.63□□□□□ -0.23
TPM1-207ENST00000403994 OR3A2P47893 321 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 CSNK2A1P68400 391 aaPredicted RBP13.63□□□□□ -0.23
TPM1-207ENST00000403994 KCNJ10P78508 379 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 TXNL4AP83876 142 aaKnown RBP13.63□□□□□ -0.23
TPM1-207ENST00000403994 P2RY6Q15077 328 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 SLC9B1Q4ZJI4 515 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 PDCD4Q53EL6 469 aaKnown RBP13.63□□□□□ -0.23
TPM1-207ENST00000403994 SFRP5Q5T4F7 317 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 NXNQ6DKJ4 435 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 SEZ6L2Q6UXD5 910 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 Q6ZT83 130 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 GRINAQ7Z429 371 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 LSRQ86X29 649 aaPredicted RBP13.63□□□□□ -0.23
TPM1-207ENST00000403994 P3H2Q8IVL5 708 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 ARFGAP2Q8N6H7 521 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 GLB1L3Q8NCI6 653 aaPredicted RBP13.63□□□□□ -0.23
TPM1-207ENST00000403994 ZNF563Q8TA94 476 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 CNOT9Q92600 299 aaKnown RBP13.63□□□□□ -0.23
TPM1-207ENST00000403994 KISS1RQ969F8 398 aaPredicted RBP13.63□□□□□ -0.23
TPM1-207ENST00000403994 PERPQ96FX8 193 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 C18orf12Q96KH6 178 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 POTEKPQ9BYX7 375 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 SLC6A13Q9NSD5 602 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 LIPT1Q9Y234 373 aa13.63□□□□□ -0.23
TPM1-207ENST00000403994 SPIN1Q9Y657 262 aaPredicted RBP13.63□□□□□ -0.23
TPM1-207ENST00000403994 ZNF724A8MTY0 619 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 SLCO1B7G3V0H7 640 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 SULT2B1O00204 365 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 AP3D1O14617 1153 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 HS3ST1O14792 307 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 ERLIN1O75477 346 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 ADAP00813 363 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 ANXA11P50995 505 aaKnown RBP13.62□□□□□ -0.23
TPM1-207ENST00000403994 TAB1Q15750 504 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 BEND6Q5SZJ8 279 aaPredicted RBP13.62□□□□□ -0.23
TPM1-207ENST00000403994 ALKBH2Q6NS38 261 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 LRRC74BQ6ZQY2 392 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 ZNF621Q6ZSS3 439 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 TMPPEQ6ZT21 453 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.62□□□□□ -0.23
TPM1-207ENST00000403994 BIVMQ86UB2 503 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 CMIPQ8IY22 773 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 WDR60Q8WVS4 1066 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 ZNF75CPQ92670 426 aaPredicted RBP13.62□□□□□ -0.23
TPM1-207ENST00000403994 ARL5BQ96KC2 179 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 SMR3AQ99954 134 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 HDHD5Q9BXW7 423 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 OR11A1Q9GZK7 315 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 MANSC1Q9H8J5 431 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 TMBIM4Q9HC24 238 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms