RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 COMMD3Q9UBI1 195 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 TNFRSF10DQ9UBN6 386 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 ADAM30Q9UKF2 790 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SPEGQ15772 3267 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SMIM30A4D0T7 59 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 PLA2G10O15496 165 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CELP19835 753 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CPN2P22792 545 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 ATP6V1E1P36543 226 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 MLLT3P42568 568 aaPredicted RBP14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 INSM1Q01101 510 aaPredicted RBP14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 DUSP8Q13202 625 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 TRA2AQ13595 282 aaKnown RBP eCLIP14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 RIN1Q13671 783 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 ZNF791Q3KP31 576 aaPredicted RBP14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 RNF44Q7L0R7 432 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 D2HGDHQ8N465 521 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 C19orf18Q8NEA5 215 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 NEIL3Q8TAT5 605 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SPRYD4Q8WW59 207 aaPredicted RBP14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SLC7A6Q92536 515 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 ZC3HAV1LQ96H79 300 aaKnown RBP14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SAMD8Q96LT4 415 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 OR2A5Q96R48 311 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SERINC2Q96SA4 455 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SECISBP2Q96T21 854 aaKnown RBP14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 ZFYVE21Q9BQ24 234 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 PPP1R3EQ9H7J1 279 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SLC7A7Q9UM01 511 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 PCDHGB7Q9Y5F8 929 aa14.7□□□□□ -0.06
CHRFAM7A-203ENST00000401522 UNC119BA6NIH7 251 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 J3QRE1 110 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SLC35G6P0C7Q6 338 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SLC2A2P11168 524 aaPredicted RBP14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 TCEA1P23193 301 aaKnown RBP14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 MAP2K3P46734 347 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 GCGRP47871 477 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CAV3P56539 151 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 EEF1A1P68104 462 aaKnown RBP14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 MRPS15P82914 257 aaKnown RBP14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CDCP2Q5VXM1 449 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 MZT2BQ6NZ67 158 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CXXC5Q7LFL8 322 aaKnown RBP14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 BBS1Q8NFJ9 593 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CCDC74BQ96LY2 380 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 UBQLN3Q9H347 655 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 FN3KQ9H479 309 aa14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 HINT3Q9NQE9 182 aaKnown RBP14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 PTPRZ1P23471 2315 aaPredicted RBP14.69□□□□□ -0.06
CHRFAM7A-203ENST00000401522 DMXL1Q9Y485 3027 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 TRAPPC13A5PLN9 417 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 HPGDSO60760 199 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SLC19A2O60779 497 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 HLA-DMAP28067 261 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 TLX1P31314 330 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 KIR2DL3P43628 341 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 GABRA4P48169 554 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 EVX1P49640 407 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 RNF144AP50876 292 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 ZNF136P52737 540 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CCDC157Q569K6 752 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CPOQ8IVL8 374 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 GALNT12Q8IXK2 581 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 RNF113BQ8IZP6 322 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 Q8N402 240 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 ACOT12Q8WYK0 555 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 FCRL4Q96PJ5 515 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 HDHD5Q9BXW7 423 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SOHLH2Q9NX45 425 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 KCMF1Q9P0J7 381 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 COL27A1Q8IZC6 1860 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SOCS6O14544 535 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CDC42EP2O14613 210 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SRPX2O60687 465 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 RGS9O75916 674 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 PRKAR1AP10644 381 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 APEX1P27695 318 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SSTR4P31391 388 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CCKBRP32239 447 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 ARL4DP49703 201 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CDK10Q15131 360 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 DUSP5Q16690 384 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 MCATQ8IVS2 390 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 RCBTB1Q8NDN9 531 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 OR52L1Q8NGH7 329 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 COL26A1Q96A83 441 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 TM4SF19Q96DZ7 209 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 DCLRE1CQ96SD1 692 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SDF2Q99470 211 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 KCNN2Q9H2S1 579 aa14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 ZNF223Q9UK11 482 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 CDV3Q9UKY7 258 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SPAARA0A1B0GVQ0 90 aa14.67□□□□□ -0.06
CHRFAM7A-203ENST00000401522 URADA6NGE7 173 aa14.67□□□□□ -0.06
CHRFAM7A-203ENST00000401522 HCRTR1O43613 425 aa14.67□□□□□ -0.06
CHRFAM7A-203ENST00000401522 B3GALT2O43825 422 aa14.67□□□□□ -0.06
CHRFAM7A-203ENST00000401522 SLC2A10O95528 541 aa14.67□□□□□ -0.06
CHRFAM7A-203ENST00000401522 DBIP07108 87 aaKnown RBP14.67□□□□□ -0.06
CHRFAM7A-203ENST00000401522 FTH1P19P0C7X4 201 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms