RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TPD52P55327 224 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-204ENST00000401473 CLDN15P56746 228 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 KCNC4Q03721 635 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 MERTKQ12866 999 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 NHSL2Q5HYW2 709 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 ARHGAP11AQ6P4F7 1023 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 DEF8Q6ZN54 512 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 GRINAQ7Z429 371 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 RANBP3LQ86VV4 465 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-204ENST00000401473 GHDCQ8N2G8 530 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 CANT1Q8WVQ1 401 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 ABTB1Q969K4 478 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-204ENST00000401473 LRGUKQ96M69 825 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 ZNF559Q9BR84 538 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 UGT2B28Q9BY64 529 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 EXO5Q9H790 373 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 EVA1AQ9H8M9 152 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 NDUFAF4Q9P032 175 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 A4GNTQ9UNA3 340 aa14.39□□□□□ -0.11
HMGA1-204ENST00000401473 DIDO1Q9BTC0 2240 aaKnown RBP14.38□□□□□ -0.11
HMGA1-204ENST00000401473 AQP12BA6NM10 295 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 NPIPA2E9PIF3 369 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 NPIPA3F8WFD2 350 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 AQP7O14520 342 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 FMO6PO60774 539 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 PEPDP12955 493 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 ZNF17P17021 662 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 LHX2P50458 406 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 CDH12P55289 794 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 CRYZQ08257 329 aaKnown RBP14.38□□□□□ -0.11
HMGA1-204ENST00000401473 MTX3Q5HYI7 312 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 C1orf146Q5VVC0 180 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 AQP12AQ8IXF9 295 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 TRIM2Q9C040 744 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 TMEM185BQ9H7F4 350 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 IL1RAPQ9NPH3 570 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 ALPK2Q86TB3 2170 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 TENM4Q6N022 2769 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 A0A0B4J2E0 115 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 A0A1B0GX12 115 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 TCRBV3S1A0A5B6 114 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 FAM47E-STBD1D6RA91 191 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 H3BML4 177 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 PYCARD-AS1I3L0S3 204 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 hCG_2039718K7EN88 272 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 DIRAS1O95057 198 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 PRSS23O95084 383 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 LYPD3O95274 346 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 IFNW1P05000 195 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 EDN3P14138 238 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 UQCRBP14927 111 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 NQO1P15559 274 aaKnown RBP14.38□□□□□ -0.11
HMGA1-204ENST00000401473 SHC1P29353 583 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 APOBEC1P41238 236 aaKnown RBP14.38□□□□□ -0.11
HMGA1-204ENST00000401473 SUCLG1P53597 346 aaKnown RBP14.38□□□□□ -0.11
HMGA1-204ENST00000401473 CLDN20P56880 219 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 AAGABQ6PD74 315 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 ATG4DQ86TL0 474 aaPredicted RBP14.38□□□□□ -0.11
HMGA1-204ENST00000401473 SPATA24Q86W54 205 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 ADGRG5Q8IZF4 528 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 LILRA2Q8N149 483 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 DTNBP1Q96EV8 351 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 TMEM27Q9HBJ8 222 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 PRDM4Q9UKN5 801 aa14.38□□□□□ -0.11
HMGA1-204ENST00000401473 MT-ND1P03886 318 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 CCNA2P20248 432 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 RAC1P63000 192 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 CCNIQ14094 377 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 C3AR1Q16581 482 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 ALG10BQ5I7T1 473 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 EMC4Q5J8M3 183 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 ULK3Q6PHR2 472 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 GFRALQ6UXV0 394 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 ZNF605Q86T29 641 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 ATP6V1C2Q8NEY4 427 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 SLC38A4Q969I6 547 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 SLC47A1Q96FL8 570 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 RHCGQ9UBD6 479 aa14.37□□□□□ -0.11
HMGA1-204ENST00000401473 GCN1Q92616 2671 aaKnown RBP14.36□□□□□ -0.11
HMGA1-204ENST00000401473 TMED7-TICAM2A0A0A6YYA0 188 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 STAMBPO95630 424 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 ACTL6AO96019 429 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 PTGS2P35354 604 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 POLR2HP52434 150 aaKnown RBP14.36□□□□□ -0.11
HMGA1-204ENST00000401473 CLDN18P56856 261 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 FOXD4Q12950 439 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-204ENST00000401473 MRPL49Q13405 166 aaKnown RBP14.36□□□□□ -0.11
HMGA1-204ENST00000401473 ZNF613Q6PF04 617 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 LINC00114Q6XXX2 140 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 WDR88Q6ZMY6 472 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 GGNQ86UU5 652 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 ST6GALNAC3Q8NDV1 305 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 DNAJA4Q8WW22 397 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-204ENST00000401473 SLCO4A1Q96BD0 722 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 DNAJA3Q96EY1 480 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 WDYHV1Q96HA8 205 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 ZNF300Q96RE9 604 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-204ENST00000401473 OR11A1Q9GZK7 315 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 CHRNA9Q9UGM1 479 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 RIMS3Q9UJD0 308 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms