RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PRAMEF26H0Y7S4 382 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 SCO2O43819 266 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 HCN1O60741 890 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 STX11O75558 287 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 PYCR1P32322 319 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 NAA10P41227 235 aaPredicted RBP12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 EIF2B5Q13144 721 aaKnown RBP12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 FHL1Q13642 323 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 ERV3-1Q14264 604 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 COL19A1Q14993 1142 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 SUZ12Q15022 739 aaKnown RBP12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 TAF8Q7Z7C8 310 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 RANBP3LQ86VV4 465 aaPredicted RBP12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 IZUMO1Q8IYV9 350 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 GJD3Q8N144 294 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 LNX2Q8N448 690 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 SDR9C7Q8NEX9 313 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 OR52L1Q8NGH7 329 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 MED17Q9NVC6 651 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 ALPK2Q86TB3 2170 aa12.44□□□□□ -0.42
GTF2F1-201ENST00000394456 SLC9B1P1A6NJY1 282 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 PRR23D1E9PI22 279 aaPredicted RBP12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 CHST10O43529 356 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 THEGLP0DJG4 465 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 PRR23D2P0DMB1 279 aaPredicted RBP12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 PRKAR1AP10644 381 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 ARSBP15848 533 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 BMP7P18075 431 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 RPS4Y1P22090 263 aaKnown RBP12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 TSFMP43897 325 aaKnown RBP12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 RABIFP47224 123 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 INPP1P49441 399 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 CLDN20P56880 219 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 GPLD1P80108 840 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 ACSM1Q08AH1 577 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 FAAH2Q6GMR7 532 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 OR4K13Q8NH42 304 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 ABHD4Q8TB40 342 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 ZPLD1Q8TCW7 415 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 GCDHQ92947 438 aaPredicted RBP12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 MS4A3Q96HJ5 214 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 MRPS7Q9Y2R9 242 aaKnown RBP12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 ADAM18Q9Y3Q7 739 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 PCDHGB7Q9Y5F8 929 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 HS3ST3A1Q9Y663 406 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 ABCA7Q8IZY2 2146 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 A0A1B0GWA3 101 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 IDSB3KWA1 339 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 CYR61O00622 381 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 RDH16O75452 317 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 TFP02787 698 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 YES1P07947 543 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 CD3GP09693 182 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 PEPDP12955 493 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 SNRPBP14678 240 aaKnown RBP12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 BTCP35070 178 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 VSX2P58304 361 aaPredicted RBP12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 GALEQ14376 348 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 PRICKLE4Q2TBC4 344 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 KIAA0895LQ68EN5 471 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 LAMTOR1Q6IAA8 161 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 SFXN4Q6P4A7 337 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 KRT74Q7RTS7 529 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 DUSP18Q8NEJ0 188 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 OR52R1Q8NGF1 315 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 SMPDL3BQ92485 455 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 TRIM63Q969Q1 353 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 PGLYRP3Q96LB9 341 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 TEX12Q9BXU0 123 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 FAM60AQ9NP50 221 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 HRASLS2Q9NWW9 162 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 POLHQ9Y253 713 aa12.43□□□□□ -0.42
GTF2F1-201ENST00000394456 FAM171A2A8MVW0 826 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 TGFBR3LH3BV60 316 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 MBTPS2O43462 519 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 SBK2P0C263 348 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 PRKCAP17252 672 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 TYRP1P17643 537 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 ARFIP1P53367 373 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 FAPQ12884 760 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 FZD2Q14332 565 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 NDUFA5Q16718 116 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 BCL2L15Q5TBC7 163 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 GARNL3Q5VVW2 1013 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 GPBAR1Q8TDU6 330 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 GHSRQ92847 366 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 THAP7Q9BT49 309 aaPredicted RBP12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 CMC2Q9NRP2 79 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 PHF11Q9UIL8 331 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 CA14Q9ULX7 337 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 INMT-MINDY4F8WBC2 141 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 SERPINI2O75830 405 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 CBX7O95931 251 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 DBIP07108 87 aaKnown RBP12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 ADRB1P08588 477 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 CTSEP14091 401 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 SLC2A5P22732 501 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 HLA-DMAP28067 261 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 GRPRP30550 384 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 PSMB10P40306 273 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms