RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 KISS1RQ969F8 398 aaPredicted RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 ADIPOR1Q96A54 375 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 ZNF578Q96N58 590 aaPredicted RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 VN1R1Q9GZP7 353 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 ABCB10Q9NRK6 738 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 SLC22A11Q9NSA0 550 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 CCDC59Q9P031 241 aaKnown RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 DAPK2Q9UIK4 370 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 SSR3Q9UNL2 185 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 B3GNT3Q9Y2A9 372 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 EXOSC1Q9Y3B2 195 aaKnown RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 MN1Q10571 1320 aaPredicted RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 WISP1O95388 367 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 TIAF1O95411 115 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 PPICP45877 212 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 HCCSP53701 268 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 CAV3P56539 151 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 FABP5Q01469 135 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 DSG2Q14126 1118 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.82□□□□□ -0.2
GPC3-202ENST00000394299 CRTC2Q53ET0 693 aaPredicted RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 PRPF38BQ5VTL8 546 aaKnown RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 C16orf47Q6ZP98 133 aaPredicted RBP13.82□□□□□ -0.2
GPC3-202ENST00000394299 LINC00299Q6ZSB3 139 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 KLBQ86Z14 1044 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 C9orf40Q8IXQ3 194 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 PARP16Q8N5Y8 322 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 C3orf49Q96BT1 292 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 COX4I2Q96KJ9 171 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 TIMP4Q99727 224 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 SYNDIG1Q9H7V2 258 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 ERVMER34-1Q9H9K5 563 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 CMC2Q9NRP2 79 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 FAIMQ9NVQ4 179 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 TMEM5Q9Y2B1 443 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 ADAM18Q9Y3Q7 739 aa13.82□□□□□ -0.2
GPC3-202ENST00000394299 A0A1W2PPC1 479 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 C4orf47A7E2U8 309 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 C12orf71A8MTZ7 269 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 MCIDASD6RGH6 385 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 HCN1O60741 890 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 UTS2O95399 124 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 HPGDP15428 266 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 CELP19835 753 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 CD40LGP29965 261 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 NR0B1P51843 470 aaKnown RBP13.81□□□□□ -0.2
GPC3-202ENST00000394299 PPP5CP53041 499 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 GPLD1P80108 840 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 QSOX2Q6ZRP7 698 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 NLGN4YQ8NFZ3 816 aaPredicted RBP13.81□□□□□ -0.2
GPC3-202ENST00000394299 OR7G1Q8NGA0 311 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 OR4K13Q8NH42 304 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 PIGKQ92643 395 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 OR1F2PQ96R84 312 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 TEAD3Q99594 435 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 TMED9Q9BVK6 235 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 HDHD5Q9BXW7 423 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 MARCH7Q9H992 704 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 MMACHCQ9Y4U1 282 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 SIRT4Q9Y6E7 314 aaPredicted RBP13.81□□□□□ -0.2
GPC3-202ENST00000394299 A0A087WUJ7 227 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 LY6G6EA0A0G2JKS1 128 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 C2orf92A0A1B0GVN3 265 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 A0A1W2PQM1 296 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 TCRBV16S1A1N1A0A5B0 115 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 PRR23D1E9PI22 279 aaPredicted RBP13.81□□□□□ -0.2
GPC3-202ENST00000394299 ZNF670-ZNF695F2Z2N8 137 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 J3QRE1 110 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 POLR1CO15160 346 aaPredicted RBP13.81□□□□□ -0.2
GPC3-202ENST00000394299 TBX1O43435 398 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 SIGLEC6O43699 453 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 ICOSLGO75144 302 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 IGHA1P01876 353 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 GUSBP08236 651 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 MSL3P1P0C860 447 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 PRR23D2P0DMB1 279 aaPredicted RBP13.81□□□□□ -0.2
GPC3-202ENST00000394299 MST1P26927 711 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 GALNSP34059 522 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 RORAP35398 523 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 TPBGQ13641 420 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 SDR9C7Q8NEX9 313 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 OR4C6Q8NH72 309 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 LCORQ96JN0 433 aaPredicted RBP13.81□□□□□ -0.2
GPC3-202ENST00000394299 SLC46A1Q96NT5 459 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 ERMAPQ96PL5 475 aaPredicted RBP13.81□□□□□ -0.2
GPC3-202ENST00000394299 TTTY10Q9BZA0 68 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 FN3KQ9H479 309 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 UBQLN4Q9NRR5 601 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 SEMA5BQ9P283 1151 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 IER3IP1Q9Y5U9 82 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 U3KQA8 63 aa13.81□□□□□ -0.2
GPC3-202ENST00000394299 A0A1B0GX78 115 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 FAM86C2PA6NEL3 165 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 CCDC182A6NF36 153 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 IL33O95760 270 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 HIST1H1CP16403 213 aaKnown RBP13.8□□□□□ -0.2
GPC3-202ENST00000394299 S100A5P33763 92 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 SDC2P34741 201 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 SOX6P35712 828 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 COPZ1P61923 177 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms