RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 NPIPA1Q9UND3 350 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 TCF19Q9Y242 345 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 EXOGQ9Y2C4 368 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PPP2R2CQ9Y2T4 447 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 AMDHD2Q9Y303 409 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 RNF114Q9Y508 228 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 GMPPBQ9Y5P6 360 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 INSL5Q9Y5Q6 135 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 N4BP2Q86UW6 1770 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 GAKO14976 1311 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 UBN2Q6ZU65 1347 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 CNTNAP2Q9UHC6 1331 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 IQGAP2Q13576 1575 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 DCHS1Q96JQ0 3298 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 DEPDC5O75140 1603 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 BRCA1P38398 1863 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 LRPPRCP42704 1394 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 CACNA1SQ13698 1873 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PLEKHH1Q9ULM0 1364 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 FHAD1B1AJZ9 1412 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 RTEL1-TNFRSF6BF6WH68 1400 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 UHRF1BP1Q6BDS2 1440 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 KNDC1Q76NI1 1749 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 NUP153P49790 1475 aaKnown RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 DMDP11532 3685 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 ERICH3Q5RHP9 1530 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 A0A0A6YYD4 124 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 A0A1W2PPV9 198 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 TCRBV9S1A1TA0A576 114 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 LINC01553A4QN01 128 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 ASPDHA6ND91 283 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 GAGE12JA6NER3 117 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 TMCO5BA8MYB1 307 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 TCP10L2B9ZVM9 353 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 G3V4G9 280 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 H3BMQ9 156 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 TULP2O00295 520 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 FBP2O00757 339 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 CYB561D2O14569 222 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 HSD17B6O14756 317 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 PPP1R2P9O14990 202 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 HDAC3O15379 428 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 B4GALT5O43286 388 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 PRKAB2O43741 272 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 SYNGR3O43761 229 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 CALUO43852 315 aaPredicted RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 XPNPEP2O43895 674 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 TYROBPO43914 113 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 PRKNO60260 465 aaPredicted RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 PFKFB2O60825 505 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 RAMP3O60896 148 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 CTSVO60911 334 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 KHDRBS3O75525 346 aaKnown RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 FCN3O75636 299 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 CRTAPO75718 401 aaPredicted RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 CDK2AP2O75956 126 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZBTB11O95625 1053 aaPredicted RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 PMS2P2O95744 297 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 TMEM50AO95807 157 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 CLIC3O95833 236 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 ANGPTL1O95841 491 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 CST4P01036 141 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 JCHAINP01591 159 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 NR3C1P04150 777 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 IFNW1P05000 195 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 HOXB7P09629 217 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 PNMA6AP0CW24 399 aaPredicted RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 IGHV4-30-4P0DP06 118 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 CDH1P12830 882 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNF12P17014 697 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 HOXB8P17481 243 aaPredicted RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 PSMC3P17980 439 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 WT1P19544 449 aaPredicted RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 EIF2S2P20042 333 aaKnown RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 EFNA1P20827 205 aaPredicted RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 IMPDH1P20839 514 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 GPD1P21695 349 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 TBXA2RP21731 343 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 IDSP22304 550 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 GIFP27352 417 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 DCKP27707 260 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 HTR2CP28335 458 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 C21orf33P30042 268 aaPredicted RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 CEACAM8P31997 349 aaPredicted RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 IFNA8P32881 189 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 RPL9P32969 192 aaKnown RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 RPL4P36578 427 aaKnown RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 NAA10P41227 235 aaPredicted RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 XCR1P46094 333 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 QARSP47897 775 aaKnown RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 AVPR1BP47901 424 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 GSSP48637 474 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 AMTP48728 403 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 CX3CR1P49238 355 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 POU3F4P49335 361 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 MRPL19P49406 292 aaKnown RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 TMED10P49755 219 aaKnown RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 FUT6P51993 359 aa1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 KPNA2P52292 529 aaKnown RBP1.32□□□□□ -2.2
RNU1-78P-201ENST00000391248 EFNB2P52799 333 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms