RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 KIR2DL3P43628 341 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 SUCLG1P53597 346 aaKnown RBP15.25■□□□□ 0.03
PRKN-202ENST00000366892 POU6F2P78424 691 aaPredicted RBP15.25■□□□□ 0.03
PRKN-202ENST00000366892 GLYR1Q49A26 553 aaPredicted RBP15.25■□□□□ 0.03
PRKN-202ENST00000366892 CCNJQ5T5M9 372 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 MSRB3Q8IXL7 192 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 UBQLNLQ8IYU4 475 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 SVOPLQ8N434 492 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 INTS12Q96CB8 462 aaKnown RBP15.25■□□□□ 0.03
PRKN-202ENST00000366892 LRRC46Q96FV0 321 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 ZFP3Q96NJ6 502 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 BTBD2Q9BX70 525 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 PIGUQ9H490 435 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 UBQLN4Q9NRR5 601 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 GPATCH2Q9NW75 528 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 GIN1Q9NXP7 522 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 JKAMPQ9P055 326 aa15.25■□□□□ 0.03
PRKN-202ENST00000366892 GMPR2Q9P2T1 348 aaKnown RBP15.25■□□□□ 0.03
PRKN-202ENST00000366892 FOXD3Q9UJU5 478 aaPredicted RBP15.25■□□□□ 0.03
PRKN-202ENST00000366892 NUP214P35658 2090 aaPredicted RBP15.25■□□□□ 0.03
PRKN-202ENST00000366892 DOCK7Q96N67 2140 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 RNF103-CHMP3A0A140T963 221 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 H0YC42 278 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 CXCR6O00574 342 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 CLOCKO15516 846 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 HCRTR2O43614 444 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 POU3F2P20265 443 aaPredicted RBP15.24■□□□□ 0.03
PRKN-202ENST00000366892 LCN1P31025 176 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 PEX19P40855 299 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 RPL5P46777 297 aaKnown RBP15.24■□□□□ 0.03
PRKN-202ENST00000366892 TPD52P55327 224 aaPredicted RBP15.24■□□□□ 0.03
PRKN-202ENST00000366892 HBA1P69905 142 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 TP53BP2Q13625 1128 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 SELPLGQ14242 412 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 PGS1Q32NB8 556 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 LIN52Q52LA3 116 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 KRT80Q6KB66 452 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 CDC73Q6P1J9 531 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 ZZZ3Q8IYH5 903 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 OR56A1Q8NGH5 318 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 OR10A6Q8NH74 314 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 GOT1L1Q8NHS2 421 aaPredicted RBP15.24■□□□□ 0.03
PRKN-202ENST00000366892 TFAP2CQ92754 450 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 CDS1Q92903 461 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 CNBD2Q96M20 576 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 PIGQQ9BRB3 760 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 CHID1Q9BWS9 393 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 ACTRT3Q9BYD9 372 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 NEUROD4Q9HD90 331 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 SLC25A37Q9NYZ2 338 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 CRIM1Q9NZV1 1036 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 SAMD4AQ9UPU9 718 aaKnown RBP15.24■□□□□ 0.03
PRKN-202ENST00000366892 PCDHB14Q9Y5E9 798 aa15.24■□□□□ 0.03
PRKN-202ENST00000366892 ANKRD17O75179 2603 aaKnown RBP15.24■□□□□ 0.03
PRKN-202ENST00000366892 C7orf72A4D263 438 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 EEF1E1-BLOC1S5C9J1V9 151 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 H0YAE9 185 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 EEF1E1O43324 174 aaKnown RBP15.23■□□□□ 0.03
PRKN-202ENST00000366892 NCK1P16333 377 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 MYF6P23409 242 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 TUBA4AP68366 448 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 NRF1Q16656 503 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 TMEM44Q2T9K0 475 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 SPDYE7PQ495Y7 208 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 KCTD21Q4G0X4 260 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 C6orf52Q5T4I8 152 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 CHMP1BQ7LBR1 199 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 EPHX4Q8IUS5 362 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 GRAMD2AQ8IUY3 354 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 GCNT2Q8N0V5 402 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 CBR4Q8N4T8 237 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 MEIOBQ8N635 442 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 GATSQ8NAP1 163 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 ADAMTS15Q8TE58 950 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 FAM162AQ96A26 154 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 ADI1Q9BV57 179 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 SFXN3Q9BWM7 321 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 YTHDF1Q9BYJ9 559 aaKnown RBP15.23■□□□□ 0.03
PRKN-202ENST00000366892 SMPD3Q9NY59 655 aaPredicted RBP15.23■□□□□ 0.03
PRKN-202ENST00000366892 DNAJB9Q9UBS3 223 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 FAF1Q9UNN5 650 aaPredicted RBP15.23■□□□□ 0.03
PRKN-202ENST00000366892 KCNE3Q9Y6H6 103 aa15.23■□□□□ 0.03
PRKN-202ENST00000366892 SAC3D1A6NKF1 404 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 SHISA8B8ZZ34 492 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 H3BML4 177 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 SOCS2O14508 198 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 HPGDP15428 266 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 CLDN20P56880 219 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 APOFQ13790 326 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 OR4F3Q6IEY1 312 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 TMEM200AQ86VY9 491 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 OR5AK3PQ8NH89 298 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 SFXN5Q8TD22 340 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 MOAP1Q96BY2 351 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 RNF145Q96MT1 663 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 SLC29A1Q99808 456 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 HHATLQ9HCP6 504 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 DCAF13Q9NV06 445 aaKnown RBP15.22■□□□□ 0.03
PRKN-202ENST00000366892 UBAP1Q9NZ09 502 aa15.22■□□□□ 0.03
PRKN-202ENST00000366892 RPS6KA6Q9UK32 745 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms