RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 IL17RDQ8NFM7 739 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 FER1L6-AS2Q96M78 137 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 FUNDC2Q9BWH2 189 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 POLHQ9Y253 713 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 LBX1P52954 281 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 FUBP1Q96AE4 644 aaKnown RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 ATXN7L1Q9ULK2 861 aaPredicted RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 ARPC5O15511 151 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 FGF4P08620 206 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 RAB13P51153 203 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 KEAP1Q14145 624 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 NPY5RQ15761 445 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 PAN3Q58A45 887 aaKnown RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 ZNF551Q7Z340 670 aaPredicted RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 AGBL5Q8NDL9 886 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 LFNGQ8NES3 379 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 DCUN1D4Q92564 292 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 TMEM19Q96HH6 336 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 METTL9Q9H1A3 318 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 UBQLN4Q9NRR5 601 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 ACPPP15309 386 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 CERS1P27544 350 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 GPR4P46093 362 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 SCML4Q8N228 414 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 ZNF454Q8N9F8 522 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 ELOVL3Q9HB03 270 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 DCAF13Q9NV06 445 aaKnown RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 SNCGO76070 127 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 CBX7O95931 251 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 FKBP2P26885 142 aaKnown RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 PRLHRP49683 370 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 BMXP51813 675 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 NAA40Q86UY6 237 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 ADAMTS14Q8WXS8 1223 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 RBMXL1Q96E39 390 aaKnown RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 COQ10AQ96MF6 247 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 HHIPQ96QV1 700 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 RPH3AQ9Y2J0 694 aaPredicted RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 SLC7A9P82251 487 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 SLC22A25Q6T423 547 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 ANKRD13BQ86YJ7 626 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 GLB1L2Q8IW92 636 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 KLHDC8BQ8IXV7 354 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 RNF170Q96K19 258 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 SIDT1Q9NXL6 827 aaKnown RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 TSPAN11A1L157 253 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 RAB40ALP0C0E4 278 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 BMP2P12643 396 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 CYBAP13498 195 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 FXYD4P59646 89 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 MRPL10Q7Z7H8 261 aaKnown RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 BPHLQ86WA6 291 aaPredicted RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 RAB40AQ8WXH6 277 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 DTD2Q96FN9 168 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 C14orf119Q9NWQ9 140 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 MRPL33O75394 65 aaKnown RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 METTL15P1P0C7V9 234 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 RAC1P63000 192 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 ZNF684Q5T5D7 378 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 ZNF296Q8WUU4 475 aaPredicted RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 ZNF587BE7ETH6 402 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 AIPO00170 330 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 GPR32O75388 356 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 PRDX3P30048 256 aaKnown RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 SOX3P41225 446 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 EEF1A1P68104 462 aaKnown RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 DMWDQ09019 674 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 WDR88Q6ZMY6 472 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 TCEAL2Q9H3H9 227 aaPredicted RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 PHIPQ8WWQ0 1821 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 BCAT2O15382 392 aaPredicted RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 MC2RQ01718 297 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 TRIM73Q86UV7 250 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 OR4M1Q8NGD0 313 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 ELP4Q96EB1 424 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 C16orf70Q9BSU1 422 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 HRASLSQ9HDD0 168 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 PLCXD1Q9NUJ7 323 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 FEZF1A0PJY2 475 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 A6NL46 340 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 ADAM23O75077 832 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 BMI1P35226 326 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 P2RX1P51575 399 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 CPXM2Q8N436 756 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 ACOT11Q8WXI4 607 aaPredicted RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 ZNF566Q969W8 418 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 UTP23Q9BRU9 249 aaKnown RBP9.08□□□□□ -0.96
CUX1-203ENST00000360264 MCOLN1Q9GZU1 580 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 C2orf78A6NCI8 922 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 SDC3O75056 442 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 ZNF44P15621 663 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 SFRP5Q5T4F7 317 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 SVBPQ8N300 66 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 TOMM40LQ969M1 308 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 MFFQ9GZY8 342 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 SMCO4Q9NRQ5 59 aa9.08□□□□□ -0.96
CUX1-203ENST00000360264 C2orf76Q3KRA6 126 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 C1orf123Q9NWV4 160 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 EHFQ9NZC4 300 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 TFP02787 698 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms