RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 OR52W1Q6IF63 320 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SLC18B1Q6NT16 456 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 BEND4Q6ZU67 534 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 C9orf62Q8N4C0 152 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 FRMD1Q8N878 549 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 IL17RCQ8NAC3 791 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 CD200R1Q8TD46 325 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 FN3KRPQ9HA64 309 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 NPFFR2Q9Y5X5 522 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 XRN1Q8IZH2 1706 aaKnown RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 CHD1O14646 1710 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF623O75123 536 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 RAD51DO75771 328 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SCAF4O95104 1147 aaKnown RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 C8orf89P0DMQ9 161 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 RPL17P18621 184 aaKnown RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 DNM1P34Q6PK57 102 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 COMMD6Q7Z4G1 85 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 WDFY2Q96P53 400 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 RHNO1Q9BSD3 238 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 PITHD1Q9GZP4 211 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 MCOLN1Q9GZU1 580 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 MEPEQ9NQ76 525 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 MRPL17Q9NRX2 175 aaKnown RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SYPP08247 313 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 CORO1AP31146 461 aaKnown RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 FAM109BQ6ICB4 259 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 TMEM65Q6PI78 240 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 FAM83HQ6ZRV2 1179 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF461Q8TAF7 563 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 THEM6Q8WUY1 208 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 MSLNLQ96KJ4 702 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SPACA7Q96KW9 195 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SEMA4CQ9C0C4 833 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 USP24Q9UPU5 2620 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ZNFX1Q9P2E3 1918 aaKnown RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 CASP8AP2Q9UKL3 1982 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 EMC8O43402 210 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 BPNT1O95861 308 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 OR13C7P0DN81 318 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 C5AR1P21730 350 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF610Q8N9Z0 462 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 UBAC2Q8NBM4 344 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SPOCK3Q9BQ16 436 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 IL20RAQ9UHF4 553 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 GAB2Q9UQC2 676 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 HCFC1P51610 2035 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SMIM35A0A1B0GVV1 85 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ONECUT3O60422 494 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 MTX2O75431 263 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ACY1Q03154 408 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 HEPHL1Q6MZM0 1159 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 LIPIQ6XZB0 460 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 CYB561A3Q8NBI2 242 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 BBS1Q8NFJ9 593 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 NUS1Q96E22 293 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 BSCL2Q96G97 398 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 PQBP1O60828 265 aaKnown RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 BPIP17213 487 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 RAB1AP62820 205 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 RANP62826 216 aaKnown RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 BEX5Q5H9J7 111 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 PM20D1Q6GTS8 502 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 CREB3L4Q8TEY5 395 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 PTP4A1Q93096 173 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SPIN2AQ99865 258 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SPIN2BQ9BPZ2 258 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF230Q9UIE0 474 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 POM121BA6NF01 834 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 H3BQ06 376 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 RHOP08100 348 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 PLEKHS1Q5SXH7 462 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ARHGAP40Q5TG30 622 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 HS6ST2Q96MM7 605 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 POFUT1Q9H488 388 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ARAFP10398 606 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 TAS2R20P59543 309 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 LTBQ06643 244 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 DLEU7Q6UYE1 221 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF417Q8TAU3 575 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ABHD4Q8TB40 342 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 AHCYL2Q96HN2 611 aaKnown RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ELF4Q99607 663 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ZDHHC5Q9C0B5 715 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF281Q9Y2X9 895 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 GP1BBP13224 206 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 IMPA1P29218 277 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 RNF144AP50876 292 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ADAM5Q6NVV9 412 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 RELL2Q8NC24 303 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 OR51D1Q8NGF3 324 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 OR4K13Q8NH42 304 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 TINAGL1Q9GZM7 467 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ABHD16BQ9H3Z7 469 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 NCDNQ9UBB6 729 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 COL1A1P02452 1464 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 GRXCR1A8MXD5 290 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 FAM227AF5H4B4 570 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 CDK2AP1O14519 115 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 EGFP01133 1207 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms