RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SORBS1Q9BX66 1292 aaKnown RBP13.95□□□□□ -0.18
LMX1B-201ENST00000355497 CPEB1Q9BZB8 566 aaKnown RBP13.95□□□□□ -0.18
LMX1B-201ENST00000355497 SLC22A7Q9Y694 548 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 ACP2P11117 423 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 GPX3P22352 226 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 IL2RGP31785 369 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 FOXA1P55317 472 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 MLLT11Q13015 90 aaPredicted RBP13.95□□□□□ -0.18
LMX1B-201ENST00000355497 GPR18Q14330 331 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 SLC9A3R2Q15599 337 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 WBP2NLQ6ICG8 309 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF705AQ6ZN79 300 aaPredicted RBP13.95□□□□□ -0.18
LMX1B-201ENST00000355497 SLC29A1Q99808 456 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 STARD5Q9NSY2 213 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 SIDT1Q9NXL6 827 aaKnown RBP13.95□□□□□ -0.18
LMX1B-201ENST00000355497 ROBO1Q9Y6N7 1651 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 A0A1W2PQ09 198 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 PRAMEF27A3QJZ7 478 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 BLACEA4D250 179 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 BHLHE40O14503 412 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 SERPINF1P36955 418 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 PLA2G7Q13093 441 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 GAB1Q13480 694 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 KIR2DS3Q14952 304 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 PRAMEF9Q5VWM5 478 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 FAM122CQ6P4D5 195 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 OR56B4Q8NH76 319 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 PSMF1Q92530 271 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 PIGCQ92535 297 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 RTP4Q96DX8 246 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 OLAHQ9NV23 265 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 BABAM2Q9NXR7 383 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 COPS3Q9UNS2 423 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 C3P01024 1663 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 A0A0A6YYC8 382 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 TMEM269A0A1B0GVZ9 245 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 I3L1I5 382 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 ONECUT3O60422 494 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 IGHG1P01857 330 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 GYPBP06028 91 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 PPP3CBP16298 524 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 GABRA2P47869 451 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 HOXA1P49639 335 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 MFGE8Q08431 387 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 NR0B2Q15466 257 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 TMEM41BQ5BJD5 291 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 EMC10Q5UCC4 262 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 CBARPQ8N350 705 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 ACOT11Q8WXI4 607 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 C16orf70Q9BSU1 422 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 APOOQ9BUR5 198 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 PGAP2Q9UHJ9 254 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 CBLCQ9ULV8 474 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 MED16Q9Y2X0 877 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 PCDHGA1Q9Y5H4 931 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 CEPT1Q9Y6K0 416 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 MROH6A6NGR9 719 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 TK1P04183 234 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 HMGN2P05204 90 aaKnown RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 CD68P34810 354 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 PTGER4P35408 488 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 RPS5P46782 204 aaKnown RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 TRA2BP62995 288 aaKnown RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 TGFBR3Q03167 851 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 PODNL1Q6PEZ8 512 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 SMAP2Q8WU79 429 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 NECTIN4Q96NY8 510 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 CMSS1Q9BQ75 279 aaKnown RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 GPR160Q9UJ42 338 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 CA5BQ9Y2D0 317 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 TEX51A0A1B0GUA7 166 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 IL1AP01583 271 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 CHRM4P08173 479 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 PRPH2P23942 346 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 NAA40Q86UY6 237 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 ACOT4Q8N9L9 421 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 OR4N2Q8NGD1 307 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 TFAP2CQ92754 450 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 MCOLN1Q9GZU1 580 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 SLC23A2Q9UGH3 650 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 SPO11Q9Y5K1 396 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 FOXE1O00358 373 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 PTHP01270 115 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 P2RY2P41231 377 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 RAP2BP61225 183 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 EMX1Q04741 257 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 GPR176Q14439 515 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 HMGN3Q15651 99 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 COX15Q7KZN9 410 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 NEIL2Q969S2 332 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 SMCO4Q9NRQ5 59 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 FAM53CQ9NYF3 392 aa13.94□□□□□ -0.18
LMX1B-201ENST00000355497 CXXC1Q9P0U4 656 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-201ENST00000355497 METTL15A6NJ78 407 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 FADS1O60427 444 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 LDB3O75112 727 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 RTP2Q5QGT7 225 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 VASNQ6EMK4 673 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 TMEM25Q86YD3 366 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 ADGRG5Q8IZF4 528 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms