RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SYN1P17600 705 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 PIGAP37287 484 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 RAB28P51157 221 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF140P52738 457 aaPredicted RBP11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF280AP59817 542 aaPredicted RBP11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 HNRNPKP61978 463 aaKnown RBP eCLIP11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 PLPP5Q8NEB5 264 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 UBXN10Q96LJ8 280 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF578Q96N58 590 aaPredicted RBP11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 MCOLN1Q9GZU1 580 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC25A32Q9H2D1 315 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 IFT22Q9H7X7 185 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 USP22Q9UPT9 525 aa11.92□□□□□ -0.5
SYNCRIP-201ENST00000355238 TRBV4-1A0A0J9YWV2 114 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 TO15178 435 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 MC3RP41968 323 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC11A1P49279 550 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 DAP3P51398 398 aaKnown RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 GRM7Q14831 915 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 INAVAQ3KP66 663 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ENTPD8Q5MY95 495 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 LY6G5CQ5SRR4 150 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 DHRS4L2Q6PKH6 230 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 LINC01599Q8WXQ3 324 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 TBC1D20Q96BZ9 403 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 EGLN3Q9H6Z9 239 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 FBRSQ9HAH7 460 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 C5AR2Q9P296 337 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC6A14Q9UN76 642 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 C20orf202A1L168 122 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 FAM183AA6NL82 134 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SCGB2A1O75556 95 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 IL33O95760 270 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ITGB2P05107 769 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SIM1P81133 766 aaPredicted RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 CMIPQ8IY22 773 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF808Q8N4W9 903 aaPredicted RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 RCBTB1Q8NDN9 531 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SPTSSAQ969W0 71 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 RBMXL1Q96E39 390 aaKnown RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 DUS3LQ96G46 650 aaKnown RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SERINC2Q96SA4 455 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 C12orf57Q99622 126 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 PCDHGA5Q9Y5G8 931 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR5K4A6NMS3 321 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 MAGEB4O15481 346 aaPredicted RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 APBB3O95704 486 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 HMGN2P05204 90 aaKnown RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SBK2P0C263 348 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 STK19P49842 368 aaPredicted RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ISL1P61371 349 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC35A2P78381 396 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ACY1Q03154 408 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC9A3R2Q15599 337 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 TRAPPC6BQ86SZ2 158 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR4N5Q8IXE1 308 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ADGRF3Q8IZF5 1079 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 RNF113BQ8IZP6 322 aaKnown RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ABHD4Q8TB40 342 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZDHHC12Q96GR4 267 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 DCLRE1CQ96SD1 692 aaKnown RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC25A21Q9BQT8 299 aaPredicted RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 HCAR1Q9BXC0 346 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR11A1Q9GZK7 315 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF629Q9UEG4 869 aaPredicted RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 MYH11P35749 1972 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 FAM155AB1AL88 458 aaPredicted RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 FRS3O43559 492 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 CDC123O75794 336 aaPredicted RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ATP1B1P05026 303 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 C6P13671 934 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 FASLGP48023 281 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 LEXMQ3ZCV2 418 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 RNF212Q495C1 297 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 GGTA1PQ4G0N0 100 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 C2orf27AQ580R0 203 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 NXNL2Q5VZ03 156 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 DNAAF1Q8NEP3 725 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR52N1Q8NH53 320 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 CHTF18Q8WVB6 975 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 KHSRPQ92945 711 aaKnown RBP eCLIP11.91□□□□□ -0.52e-7■■■■□ 24.5
SYNCRIP-201ENST00000355238 TAS2R16Q9NYV7 291 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 USP36Q9P275 1121 aaKnown RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF337Q9Y3M9 751 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 BACE2Q9Y5Z0 518 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 TMEM200CA6NKL6 621 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SHC1P29353 583 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 RPS19P39019 145 aaKnown RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 GP2P55259 537 aaKnown RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 MLC1Q15049 377 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 EBPQ15125 230 aaKnown RBP11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 VASNQ6EMK4 673 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 NDUFAF7Q7L592 441 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF611Q8N823 705 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 LFNGQ8NES3 379 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 DEFB118Q96PH6 123 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 HAPLN2Q9GZV7 340 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 IL26Q9NPH9 171 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SERTAD4Q9NUC0 356 aa11.91□□□□□ -0.5
SYNCRIP-201ENST00000355238 SNX11Q9Y5W9 270 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms