RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 RPS6KA6Q9UK32 745 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 CAMK2AQ9UQM7 478 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 SLC9A8Q9Y2E8 581 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 V9GYQ6 96 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 ZGRF1Q86YA3 2104 aa19.98■□□□□ 0.79
SHMT1-203ENST00000354098 LINC01387J3KSC0 135 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 BCKDKO14874 412 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 PRKD3O94806 890 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 PLA2G2AP14555 144 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 CCNA2P20248 432 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 SHC1P29353 583 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 SUCLG1P53597 346 aaKnown RBP19.97■□□□□ 0.79
SHMT1-203ENST00000354098 GABPB1Q06547 395 aaPredicted RBP19.97■□□□□ 0.79
SHMT1-203ENST00000354098 OR1Q1Q15612 314 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 WLSQ5T9L3 541 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 C3P1Q6ZMU1 363 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 FKBP9P1Q75LS8 142 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 RANBP3LQ86VV4 465 aaPredicted RBP19.97■□□□□ 0.79
SHMT1-203ENST00000354098 DOLPP1Q86YN1 238 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 LSMEM1Q8N8F7 131 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 MCUR1Q96AQ8 359 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 C3orf49Q96BT1 292 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 ASB9Q96DX5 294 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 ZNF559Q9BR84 538 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 PRDM14Q9GZV8 571 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 AP4B1Q9Y6B7 739 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 ACOT8O14734 319 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 SEC14L5O43304 696 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 SEMA7AO75326 666 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 CPN1P15169 458 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 ELK4P28324 431 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 APOBEC1P41238 236 aaKnown RBP19.97■□□□□ 0.79
SHMT1-203ENST00000354098 RAC1P63000 192 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 ZNF585AQ6P3V2 769 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 ASRGL1Q7L266 308 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 GGNQ86UU5 652 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 DHFR2Q86XF0 187 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 PRR7Q8TB68 274 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 TRIM2Q9C040 744 aa19.97■□□□□ 0.79
SHMT1-203ENST00000354098 SAMD4AQ9UPU9 718 aaKnown RBP19.97■□□□□ 0.79
SHMT1-203ENST00000354098 TMED7-TICAM2A0A0A6YYA0 188 aa19.96■□□□□ 0.79
SHMT1-203ENST00000354098 A0A1B0GWA3 101 aa19.96■□□□□ 0.79
SHMT1-203ENST00000354098 CPSF4LA6NMK7 179 aaKnown RBP19.96■□□□□ 0.79
SHMT1-203ENST00000354098 PRRG2O14669 202 aa19.96■□□□□ 0.79
SHMT1-203ENST00000354098 SFTPDP35247 375 aa19.96■□□□□ 0.79
SHMT1-203ENST00000354098 POLR2HP52434 150 aaKnown RBP19.96■□□□□ 0.79
SHMT1-203ENST00000354098 BCL2A1Q16548 175 aa19.96■□□□□ 0.79
SHMT1-203ENST00000354098 IFI44LQ53G44 452 aa19.96■□□□□ 0.79
SHMT1-203ENST00000354098 ENTPD8Q5MY95 495 aa19.96■□□□□ 0.79
SHMT1-203ENST00000354098 DEF8Q6ZN54 512 aa19.96■□□□□ 0.79
SHMT1-203ENST00000354098 EID3Q8N140 333 aa19.96■□□□□ 0.79
SHMT1-203ENST00000354098 AMBRA1Q9C0C7 1298 aa19.96■□□□□ 0.79
SHMT1-203ENST00000354098 TMED7Q9Y3B3 224 aa19.96■□□□□ 0.79
SHMT1-203ENST00000354098 RP1L1Q8IWN7 2480 aaPredicted RBP19.96■□□□□ 0.79
SHMT1-203ENST00000354098 HTR3AP46098 478 aa19.95■□□□□ 0.78
SHMT1-203ENST00000354098 SELENBP1Q13228 472 aa19.95■□□□□ 0.78
SHMT1-203ENST00000354098 C1QL3Q5VWW1 255 aa19.95■□□□□ 0.78
SHMT1-203ENST00000354098 LCN8Q6JVE9 175 aa19.95■□□□□ 0.78
SHMT1-203ENST00000354098 PHF10Q8WUB8 498 aaKnown RBP19.95■□□□□ 0.78
SHMT1-203ENST00000354098 MUC13Q9H3R2 512 aa19.95■□□□□ 0.78
SHMT1-203ENST00000354098 TMEM27Q9HBJ8 222 aa19.95■□□□□ 0.78
SHMT1-203ENST00000354098 RPS6KB2Q9UBS0 482 aa19.95■□□□□ 0.78
SHMT1-203ENST00000354098 CHRNA9Q9UGM1 479 aa19.95■□□□□ 0.78
SHMT1-203ENST00000354098 SLC7A8Q9UHI5 535 aa19.95■□□□□ 0.78
SHMT1-203ENST00000354098 GTF3C1Q12789 2109 aa19.95■□□□□ 0.78
SHMT1-203ENST00000354098 TRGV8A0A0C4DH27 118 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 TMEM72A0PK05 275 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 FMO6PO60774 539 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 CTU2Q2VPK5 515 aaKnown RBP19.94■□□□□ 0.78
SHMT1-203ENST00000354098 TMEM176BQ3YBM2 270 aaPredicted RBP19.94■□□□□ 0.78
SHMT1-203ENST00000354098 ATG4DQ86TL0 474 aaPredicted RBP19.94■□□□□ 0.78
SHMT1-203ENST00000354098 ADAMTS16Q8TE57 1224 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 OR11A1Q9GZK7 315 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 SERINC1Q9NRX5 453 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 PRDM4Q9UKN5 801 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 POMPQ9Y244 141 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 A0A0B4J2E0 115 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 A0A0J9YW62 118 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 A0A1B0GX12 115 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 TCRBV5S2A0A599 114 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 KDM4EB2RXH2 506 aaPredicted RBP19.94■□□□□ 0.78
SHMT1-203ENST00000354098 EIF1AYO14602 144 aaKnown RBP19.94■□□□□ 0.78
SHMT1-203ENST00000354098 THY1P04216 161 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 STSP08842 583 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 YAP1P46937 504 aaKnown RBP19.94■□□□□ 0.78
SHMT1-203ENST00000354098 CDH12P55289 794 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 TRAP1Q12931 704 aaKnown RBP19.94■□□□□ 0.78
SHMT1-203ENST00000354098 ALG10BQ5I7T1 473 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 C3orf33Q6P1S2 294 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 PLXDC2Q6UX71 529 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 TSEN54Q7Z6J9 526 aaKnown RBP19.94■□□□□ 0.78
SHMT1-203ENST00000354098 PM20D2Q8IYS1 436 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 RPRMLQ8N4K4 120 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 GEMIN6Q8WXD5 167 aaKnown RBP19.94■□□□□ 0.78
SHMT1-203ENST00000354098 DNAJA3Q96EY1 480 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 PYURFQ96I23 114 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 TUBA1CQ9BQE3 449 aa19.94■□□□□ 0.78
SHMT1-203ENST00000354098 H0Y3Z8 333 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 TNFSF11O14788 317 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 CXCR1P25024 350 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms