RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 NHLRC1Q6VVB1 395 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 B3GLCTQ6Y288 498 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF813Q6ZN06 617 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 REC114Q7Z4M0 266 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF546Q86UE3 836 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ACBD7Q8N6N7 88 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 CELF5Q8N6W0 485 aaKnown RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 OR4K5Q8NGD3 323 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF671Q8TAW3 534 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 PHYHIPQ92561 330 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 PIGKQ92643 395 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 VOPP1Q96AW1 172 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 RAB3CQ96E17 227 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 MOGAT1Q96PD6 335 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 PBX4Q9BYU1 374 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 AP5M1Q9H0R1 490 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 AUNIPQ9H7T9 357 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 PDFQ9HBH1 243 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 DZANK1Q9NVP4 752 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 COMMD9Q9P000 198 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 UPB1Q9UBR1 384 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 LRFN2Q9ULH4 789 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 SLC45A1Q9Y2W3 748 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 EVPLQ92817 2033 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 CACNA1BQ00975 2339 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 GNG14A0A1W2PPG7 69 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 MYBPHLA2RUH7 354 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 OR6C74A6NCV1 312 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 LRIT2A6NDA9 550 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 GGT3PA6NGU5 568 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 DRGXA6NNA5 263 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 COLCA2A8K830 154 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 TMEM189-UBE2V1I3L0A0 370 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 CXCL11O14625 94 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 FGF16O43320 207 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 IGHV2-5P01817 119 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 RAB40ALP0C0E4 278 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 EPXP11678 715 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 UQCRC2P22695 453 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 MMP11P24347 488 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 SOAT1P35610 550 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 LUMP51884 338 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-201ENST00000343524 TBX4P57082 545 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 HBA1P69905 142 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 SORDQ00796 357 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 INSM1Q01101 510 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-201ENST00000343524 PTSQ03393 145 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF763Q0D2J5 394 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 TMEM115Q12893 351 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-201ENST00000343524 ERV3-1Q14264 604 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 NKPD1Q17RQ9 610 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 ANKRD39Q53RE8 183 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 AADACL4Q5VUY2 407 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 GLT8D1Q68CQ7 371 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 HEPHL1Q6MZM0 1159 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 OVCH1Q7RTY7 1134 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 CEACAM19Q7Z692 300 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 OR1S2Q8NGQ3 325 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 OR5W2Q8NH69 310 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 AKR7LQ8NHP1 331 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 RNF141Q8WVD5 230 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 RAB40AQ8WXH6 277 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 PPCDCQ96CD2 204 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 PEX11GQ96HA9 241 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 CAMK1GQ96NX5 476 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 ALG8Q9BVK2 526 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF471Q9BX82 626 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-201ENST00000343524 TOLLIPQ9H0E2 274 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 CXCL16Q9H2A7 254 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 TUBA4BQ9H853 241 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 TREM1Q9NP99 234 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 GPATCH2Q9NW75 528 aa7.55□□□□□ -1.2
ATG4A-201ENST00000343524 TMEM200CA6NKL6 621 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ANKRD66B4E2M5 251 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TSTD3H0UI37 97 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 H0YIV9 168 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 SIGLEC5O15389 551 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 YY2O15391 372 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 OIP5O43482 229 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 OR2T1O43869 369 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 VEGFDO43915 354 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 PRKRAO75569 313 aaKnown RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 AKR7A3O95154 331 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ARIH2O95376 493 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 C6orf47O95873 294 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ADH1CP00326 375 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 IFNA2P01563 188 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 CD8AP01732 235 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 LGALS2P05162 132 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 RNF224P0DH78 156 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 MUC1P15941 1255 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 CBR1P16152 277 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ANXA7P20073 488 aaKnown RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 AOAHP28039 575 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 S100A2P29034 98 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 OR1E1P30953 314 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 HOXA11P31270 313 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TRHRP34981 398 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 HTR5AP47898 357 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms