RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 RTP2Q5QGT7 225 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 SHEQ5VZ18 495 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 ZNF322Q6U7Q0 402 aaPredicted RBP11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 MEPCEQ7L2J0 689 aaKnown RBP11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 NRARPQ7Z6K4 114 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 FAM109AQ8N4B1 249 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 OR7D2Q96RA2 312 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 NICN1Q9BSH3 213 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 MRI1Q9BV20 369 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 TPPP3Q9BW30 176 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 HCAR1Q9BXC0 346 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 TGIF2Q9GZN2 237 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 PATZ1Q9HBE1 687 aaKnown RBP11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 PGAP2Q9UHJ9 254 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 PRSS21Q9Y6M0 314 aa11.4□□□□□ -0.59
SEMA6A-202ENST00000343348 ANTXRLA6NF34 631 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 H7C1C5 153 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 RNASET2O00584 256 aaKnown RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 GAPDHSO14556 408 aaPredicted RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ONECUT3O60422 494 aaPredicted RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 IVDP26440 423 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 LCN6P62502 163 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 RPS27AP62979 156 aaKnown RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 UBA52P62987 128 aaKnown RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 CHRNEQ04844 493 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 RING1Q06587 406 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 TCEAL1Q15170 157 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 CGB2Q6NT52 195 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 OR9A4Q8NGU2 314 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ADOQ96SZ5 270 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ZFP57Q9NU63 452 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 MROH6A6NGR9 719 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 OR5K4A6NMS3 321 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 PRAF2O60831 178 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 PAPD4Q6PIY7 484 aaKnown RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 PLXDC1Q8IUK5 500 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 GLB1L2Q8IW92 636 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ADGRF3Q8IZF5 1079 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 CELF2-AS1Q8N7Q2 184 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 NANOS1Q8WY41 292 aaKnown RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 RSPRY1Q96DX4 576 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 BMFQ96LC9 184 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 C16orf70Q9BSU1 422 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 LINC00597Q9H2U6 94 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 TUBB1Q9H4B7 451 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ELOVL3Q9HB03 270 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 IL26Q9NPH9 171 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 GJE1A6NN92 205 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 CSF2RAP15509 400 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ZNF28P17035 718 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 NDUFA6P56556 154 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ZC3H3Q8IXZ2 948 aaKnown RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 TMEFF1Q8IYR6 380 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ENTHD1Q8IYW4 607 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 LILRB4Q8NHJ6 448 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ADAMTS16Q8TE57 1224 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 GMPR2Q9P2T1 348 aaKnown RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 TRBV4-1A0A0J9YWV2 114 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ACOD1A6NK06 481 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 B4DXG7 233 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 GCH1P30793 250 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 NPBWR1P48145 328 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 EFNA3P52797 238 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 EPHA4P54764 986 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 KCNIP4Q6PIL6 250 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 SLC7A13Q8TCU3 470 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 SFXN2Q96NB2 322 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 C20orf24Q9BUV8 137 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 WWTR1Q9GZV5 400 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 HOXD1Q9GZZ0 328 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 OR52D1Q9H346 318 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 C10orf71Q711Q0 1435 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 SEC14L2O76054 403 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 TSFMP43897 325 aaKnown RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 OR1Q1Q15612 314 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 TRIM61Q5EBN2 209 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 SVBPQ8N300 66 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 FAM160A2Q8N612 972 aaPredicted RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ITPKCQ96DU7 683 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 HEBP1Q9NRV9 189 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 AP1G1O43747 822 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ITGAMP11215 1152 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 IL32P24001 234 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 CASP6P55212 293 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 RPS25P62851 125 aaKnown RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 GPR18Q14330 331 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 MEF2DQ14814 521 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 NIPAL3Q6P499 406 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 SLC35D2Q76EJ3 337 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ACOT4Q8N9L9 421 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 TMEM163Q8TC26 289 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ZNF845Q96IR2 970 aaPredicted RBP11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ZNF597Q96LX8 424 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 SLC23A2Q9UGH3 650 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 ACAD8Q9UKU7 415 aa11.39□□□□□ -0.59
SEMA6A-202ENST00000343348 GASTP01350 101 aa11.38□□□□□ -0.59
SEMA6A-202ENST00000343348 APOA2P02652 100 aa11.38□□□□□ -0.59
SEMA6A-202ENST00000343348 SERPINF1P36955 418 aa11.38□□□□□ -0.59
SEMA6A-202ENST00000343348 VASPP50552 380 aaPredicted RBP11.38□□□□□ -0.59
SEMA6A-202ENST00000343348 WDR5P61964 334 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms