RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 TSPAN6O43657 245 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 BMP4P12644 408 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 NDUFV2P19404 249 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ZNF92Q03936 586 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TAF1CQ15572 869 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 SLC9A3R2Q15599 337 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 SLC22A6Q4U2R8 563 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 FAM69BQ5VUD6 431 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 KIAA0907Q7Z7F0 614 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 CILP2Q8IUL8 1156 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 CLDN22Q8N7P3 220 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 FBXO15Q8NCQ5 510 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 OR4F15Q8NGB8 312 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 OR6M1Q8NGM8 313 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 OR4F5Q8NH21 305 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 SPPL2BQ8TCT7 592 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 SLC25A46Q96AG3 418 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 OR4F4Q96R69 305 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TPPP3Q9BW30 176 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ARNT2Q9HBZ2 717 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 CA14Q9ULX7 337 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 NENFQ9UMX5 172 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 SLCO1B1Q9Y6L6 691 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TRAV18A0A075B6X5 111 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 LOC102723532A0A0G2JNH3 316 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 NCBP2LA6PVI3 153 aaKnown RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 PQBP1O60828 265 aaKnown RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 PDGFBP01127 241 aaPredicted RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 SYPP08247 313 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 MGMTP16455 207 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 AADACP22760 399 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 OMGP23515 440 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SHMT2P34897 504 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 PRPS1P60891 318 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 MAXP61244 160 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 FBXO48Q5FWF7 155 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SLC6A19Q695T7 634 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 GRINAQ7Z429 371 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 OR6N2Q8NGY6 317 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 WDR77Q9BQA1 342 aaPredicted RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 MMP26Q9NRE1 261 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 RASD1Q9Y272 281 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 ZNF536O15090 1300 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 MYOCOSA0A1B0GUC4 107 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 FTCDNL1E5RQL4 147 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 OAS1P00973 400 aaKnown RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 GALTP07902 379 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 PIGPP57054 158 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 NHLH2Q02577 135 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 DMWDQ09019 674 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SPP2Q13103 211 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 Q8N9G6 341 aaPredicted RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 GCDHQ92947 438 aaPredicted RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 CMTM7Q96FZ5 175 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 PRRC1Q96M27 445 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 TM6SF2Q9BZW4 377 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 FAM53CQ9NYF3 392 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 TMEM94Q12767 1356 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 LOC105369274A0A096LPK9 316 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 FAM159BA6NKW6 160 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 OLFM2O95897 454 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 MT-CYBP00156 380 aaPredicted RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 KLRC2P26717 231 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 PBX1P40424 430 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 P2RX3P56373 397 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SLC7A9P82251 487 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 CLLU1Q5K131 121 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 TMEM220Q6QAJ8 160 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 OR4N4Q8N0Y3 316 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 LSMEM1Q8N8F7 131 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 TP53RKQ96S44 253 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 UBL7Q96S82 380 aaPredicted RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 PDE7BQ9NP56 450 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 EHFQ9NZC4 300 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 KLRF1Q9NZS2 232 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 RPH3ALQ9UNE2 315 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 GPR39O43194 453 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 AK1P00568 194 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 OR13C7P0DN81 318 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 KDELR2P33947 212 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 CCR6P51684 374 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 KIAA1024LP59773 190 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 RBM39Q14498 530 aaKnown RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 PLGLAQ15195 96 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 STEAP1BQ6NZ63 245 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 ZNF485Q8NCK3 441 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 DTD1Q8TEA8 209 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SLC39A7Q92504 469 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SFXN2Q96NB2 322 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 LYSMD1Q96S90 227 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 DDX31Q9H8H2 851 aaKnown RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 DDX60LQ5H9U9 1706 aaKnown RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 ATRNO75882 1429 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 CLDN11O75508 207 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 RECQL4O94761 1208 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 LPLP06858 475 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SRMP19623 302 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 NME2P22392 152 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 MZT1Q08AG7 82 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 HIST3H3Q16695 136 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms