RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 FAM86C2PA6NEL3 165 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PCP4L1A6NKN8 68 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 FAM74A7A6NL05 159 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 ARPC5O15511 151 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 HOXA2O43364 376 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 RPA2P15927 270 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 ANXA7P20073 488 aaKnown RBP8.94□□□□□ -0.98
HOXA1-201ENST00000343060 CTGFP29279 349 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PYCR1P32322 319 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 RECQLP46063 649 aaPredicted RBP8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PRKAG1P54619 331 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PPP2CBP62714 309 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PPP2CAP67775 309 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 FOXK2Q01167 660 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DUSP2Q05923 314 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 TGM3Q08188 693 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 FGL1Q08830 312 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 POU4F2Q12837 409 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 FAM74A3Q4VXF1 159 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PDSS1Q5T2R2 415 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 HEPHL1Q6MZM0 1159 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 ZNF793Q6ZN11 406 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 C17orf107Q6ZR85 190 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 SSX6Q7RTT6 188 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 TRMT11Q7Z4G4 463 aaKnown RBP8.94□□□□□ -0.98
HOXA1-201ENST00000343060 SYT9Q86SS6 491 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 TRAPPC5Q8IUR0 188 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 LURAP1LQ8IV03 231 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 ZNF547Q8IVP9 402 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DCUN1D3Q8IWE4 304 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 CAMKVQ8NCB2 501 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DNAAF1Q8NEP3 725 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 VN1R2Q8NFZ6 395 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 ZNF671Q8TAW3 534 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 SMPDL3BQ92485 455 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PIGKQ92643 395 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DTD2Q96FN9 168 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 STARD7Q9NQZ5 370 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 SIDT1Q9NXL6 827 aaKnown RBP8.94□□□□□ -0.98
HOXA1-201ENST00000343060 SLC7A7Q9UM01 511 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 ZNF443Q9Y2A4 671 aaPredicted RBP8.94□□□□□ -0.98
HOXA1-201ENST00000343060 SLC35A3Q9Y2D2 325 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 TCF20Q9UGU0 1960 aaKnown RBP8.94□□□□□ -0.98
HOXA1-201ENST00000343060 A0A1B0GW55 424 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 EMC8O43402 210 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 CLEC3AO75596 197 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 LYPD3O95274 346 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PAPLNO95428 1278 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 EGFP01133 1207 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 ELFN1P0C7U0 828 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DUX4L2P0CJ85 424 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DUX4L3P0CJ86 424 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DUX4L4P0CJ87 422 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DUX4L5P0CJ88 424 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DUX4L6P0CJ89 424 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DUX4L7P0CJ90 424 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 GDI2P50395 445 aaKnown RBP8.94□□□□□ -0.98
HOXA1-201ENST00000343060 ZNF136P52737 540 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 ERVFC1P60507 584 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PRR5P85299 388 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PAQR7Q86WK9 346 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 RNF113BQ8IZP6 322 aaKnown RBP8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PCSK9Q8NBP7 692 aaKnown RBP8.94□□□□□ -0.98
HOXA1-201ENST00000343060 OR2L2Q8NH16 312 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 RPS4Y2Q8TD47 263 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 FCAMRQ8WWV6 532 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PEX11GQ96HA9 241 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DERL3Q96Q80 235 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 OR1F2PQ96R84 312 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 CD180Q99467 661 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 USB1Q9BQ65 265 aaKnown RBP8.94□□□□□ -0.98
HOXA1-201ENST00000343060 ENKD1Q9H0I2 346 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 BARX1Q9HBU1 254 aaPredicted RBP8.94□□□□□ -0.98
HOXA1-201ENST00000343060 SPG21Q9NZD8 308 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 DUX4Q9UBX2 424 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 NDRG3Q9UGV2 375 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 PLAGL1Q9UM63 463 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 SLC6A5Q9Y345 797 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 INSL5Q9Y5Q6 135 aa8.94□□□□□ -0.98
HOXA1-201ENST00000343060 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 PRAMEF2O60811 474 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 KHDRBS3O75525 346 aaKnown RBP8.93□□□□□ -0.98
HOXA1-201ENST00000343060 CBX7O95931 251 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 APOC3P02656 99 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 CTSLP07711 333 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 MRPL3P09001 348 aaKnown RBP8.93□□□□□ -0.98
HOXA1-201ENST00000343060 VSIG10L2P0DP72 767 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 MAKP20794 623 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 MST1P26927 711 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 P2RX1P51575 399 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 EPHB3P54753 998 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 H2BFSP57053 126 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 GRM7Q14831 915 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 CEBPEQ15744 281 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 FAM46CQ5VWP2 391 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 MRM1Q6IN84 353 aaKnown RBP8.93□□□□□ -0.98
HOXA1-201ENST00000343060 FRRS1Q6ZNA5 592 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 HDDC3Q8N4P3 179 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 OR5AR1Q8NGP9 310 aa8.93□□□□□ -0.98
HOXA1-201ENST00000343060 ST8SIA2Q92186 375 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms