RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 C17orf82Q86X59 251 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 OR8J2Q8NGG1 315 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 NFKBIDQ8NI38 313 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 ZFPM2Q8WW38 1151 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 TWSG1Q9GZX9 223 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 PIGUQ9H490 435 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 DDX31Q9H8H2 851 aaKnown RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 BEX1Q9HBH7 125 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 GSN-AS1Q9NRJ2 163 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 SIGLEC6O43699 453 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 CSO75390 466 aaKnown RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 WDPCPO95876 746 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 GASTP01350 101 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 EPHA8P29322 1005 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 CSF2RBP32927 897 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 CRYBB2P43320 205 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 RPS26P62854 115 aaKnown RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 ERVK-25P63136 954 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 IL18Q14116 193 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 PAN3Q58A45 887 aaKnown RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 MSANTD1Q6ZTZ1 278 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 ZFP82Q8N141 532 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 C19orf47Q8N9M1 422 aaKnown RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 BEST4Q8NFU0 473 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 OR9Q1Q8NGQ5 310 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 CCDC3Q9BQI4 270 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 NUDT22Q9BRQ3 303 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 PELOQ9BRX2 385 aaKnown RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 CTSFQ9UBX1 484 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 ENTPD2Q9Y5L3 495 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 MFSD2BA6NFX1 497 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 PDCD5O14737 125 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 SCG5P05408 212 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 PSMA1P25786 263 aaKnown RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 SOAT1P35610 550 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 HSF2Q03933 536 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 SPHARQ15513 63 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 ZNF124Q15973 351 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 SLC5A12Q1EHB4 618 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 TBC1D19Q8N5T2 526 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 RERGQ96A58 199 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 RBM14Q96PK6 669 aaKnown RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 POLR2J2Q9GZM3 115 aaKnown RBP13.97□□□□□ -0.17
BRAT1-201ENST00000340611 SEMA6CQ9H3T2 930 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 B3GAT2Q9NPZ5 323 aa13.97□□□□□ -0.17
BRAT1-201ENST00000340611 SGK494L7N484 410 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 ST8SIA5O15466 376 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 DPM1O60762 260 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 AIFM1O95831 613 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 LPLP06858 475 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 PCGF2P35227 344 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 RUNX2Q13950 521 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 SLC9A5Q14940 896 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 TMEM88Q6PEY1 159 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 RRM2BQ7LG56 351 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 NLRC3Q7RTR2 1065 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 SZRD1Q7Z422 152 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.17
BRAT1-201ENST00000340611 CSNK1A1LQ8N752 337 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 CCDC74AQ96AQ1 378 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 SGK3Q96BR1 496 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 WBP1Q96G27 269 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 ARRDC1-AS1Q9H2J1 176 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 ACER3Q9NUN7 267 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 GPATCH2Q9NW75 528 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 ASB4Q9Y574 426 aa13.96□□□□□ -0.17
BRAT1-201ENST00000340611 IGHV1OR21-1A0A087WYE8 117 aa13.96□□□□□ -0.18
BRAT1-201ENST00000340611 C1orf226A1L170 272 aa13.96□□□□□ -0.18
BRAT1-201ENST00000340611 HBQ1P09105 142 aa13.96□□□□□ -0.18
BRAT1-201ENST00000340611 DNASE1P24855 282 aa13.96□□□□□ -0.18
BRAT1-201ENST00000340611 SIM1P81133 766 aaPredicted RBP13.96□□□□□ -0.18
BRAT1-201ENST00000340611 RCBTB1Q8NDN9 531 aa13.96□□□□□ -0.18
BRAT1-201ENST00000340611 SAP25Q8TEE9 199 aa13.96□□□□□ -0.18
BRAT1-201ENST00000340611 TM4SF19Q96DZ7 209 aa13.96□□□□□ -0.18
BRAT1-201ENST00000340611 SARGQ9BW04 601 aa13.96□□□□□ -0.18
BRAT1-201ENST00000340611 YARS2Q9Y2Z4 477 aaKnown RBP13.96□□□□□ -0.18
BRAT1-201ENST00000340611 NINQ8N4C6 2090 aa13.96□□□□□ -0.18
BRAT1-201ENST00000340611 A0A1B0GTQ1 180 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 GADD45GO95257 159 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 CBR1P16152 277 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 RAB3BP20337 219 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 PDE7AQ13946 482 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 C22orf42Q6IC83 251 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 JAZF1Q86VZ6 243 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 OR9A4Q8NGU2 314 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 OR52N1Q8NH53 320 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 SLC19A3Q9BZV2 496 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 NIT2Q9NQR4 276 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 CNOT2Q9NZN8 540 aaKnown RBP13.95□□□□□ -0.18
BRAT1-201ENST00000340611 A0A1W2PRB8 838 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 ZNF670-ZNF695F2Z2N8 137 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 PRMT3O60678 531 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 APOL3O95236 402 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 CRISP1P54107 249 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 STXBP1P61764 594 aaKnown RBP13.95□□□□□ -0.18
BRAT1-201ENST00000340611 VASNQ6EMK4 673 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 ALKAL2Q6UX46 152 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 MCATQ8IVS2 390 aaKnown RBP13.95□□□□□ -0.18
BRAT1-201ENST00000340611 GHDCQ8N2G8 530 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 MARVELD1Q9BSK0 173 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms