RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 PAPD5Q8NDF8 572 aaKnown RBP11.04□□□□□ -0.64
SHANK2-201ENST00000338508 TMEM239Q8WW34 195 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 FAXDC2Q96IV6 333 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 HES7Q9BYE0 225 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 ADAMTS6Q9UKP5 1117 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 NINQ8N4C6 2090 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 BTBD17A6NE02 478 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 PRAMEF26H0Y7S4 382 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 CLDN1O95832 211 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 HTR1EP28566 365 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 HLA-FP30511 346 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 SSTR2P30874 369 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 BMPR1AP36894 532 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 SLC6A8P48029 635 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 ARSDP51689 593 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 RAB41Q5JT25 222 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 KCNIP4Q6PIL6 250 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 MMP21Q8N119 569 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 ACVR1CQ8NER5 493 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 UPRTQ96BW1 309 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 FUNDC2Q9BWH2 189 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 PTHP01270 115 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 PIGRP01833 764 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 ERVPABLB-1P60509 514 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 PPP1R3BQ86XI6 285 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 HPSE2Q8WWQ2 592 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 ZNF778Q96MU6 729 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 EGLN3Q9H6Z9 239 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 POPDC3Q9HBV1 291 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 TXNL4BQ9NX01 149 aaKnown RBP11.04□□□□□ -0.64
SHANK2-201ENST00000338508 Q9Y3F1 56 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 ZNF816-ZNF321PA0A0X1KG74 233 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 H7C1C5 153 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 SLC35E2BP0CK96 405 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 LCN6P62502 163 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 S100A7AQ86SG5 101 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 ZNF321PQ8N8H1 164 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 UHRF2Q96PU4 802 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 MTCH1Q9NZJ7 389 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 SIX4Q9UIU6 781 aa11.04□□□□□ -0.64
SHANK2-201ENST00000338508 FANCGO15287 622 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 IDUAP35475 653 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 AHRP35869 848 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 MTCP1P56278 107 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 GRB2P62993 217 aaKnown RBP11.03□□□□□ -0.64
SHANK2-201ENST00000338508 TNK1Q13470 666 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 FAM122CQ6P4D5 195 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 OR52E1Q8NGJ3 308 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 SLC2A8Q9NY64 477 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 MYH1P12882 1939 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 MYH4Q9Y623 1939 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 RPS10-NUDT3A0A1W2PQS6 291 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 STMND1H3BQB6 276 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 SDHDO14521 159 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 MSTNO14793 375 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 TK1P04183 234 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 DRD1P21728 446 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 RPS10P46783 165 aaKnown RBP11.03□□□□□ -0.64
SHANK2-201ENST00000338508 ATP4BP51164 291 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 ILKQ13418 452 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 FAM43BQ6ZT52 329 aaPredicted RBP11.03□□□□□ -0.64
SHANK2-201ENST00000338508 VRK2Q86Y07 508 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 BHLHE23Q8NDY6 225 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 DDX31Q9H8H2 851 aaKnown RBP11.03□□□□□ -0.64
SHANK2-201ENST00000338508 FBXO7Q9Y3I1 522 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 COL3A1P02461 1466 aaPredicted RBP11.03□□□□□ -0.64
SHANK2-201ENST00000338508 PRKYO43930 277 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 PRAMEF4O60810 478 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 F2P00734 622 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 HEXAP06865 529 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 PSMB5P28074 263 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 ZNF684Q5T5D7 378 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 CMTM2Q8TAZ6 248 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 OCSTAMPQ9BR26 566 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 TM7SF3Q9NS93 570 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 MYH14Q7Z406 1995 aaKnown RBP11.03□□□□□ -0.64
SHANK2-201ENST00000338508 TCAPO15273 167 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 DPM1O60762 260 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 EMP3P54852 163 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 ADAM19Q9H013 955 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 MED20Q9H944 212 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 CACNG2Q9Y698 323 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 TMEM269A0A1B0GVZ9 245 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 H0YAE9 185 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 PIRO00625 290 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 TPT1P13693 172 aaKnown RBP11.03□□□□□ -0.64
SHANK2-201ENST00000338508 ATP1B3P54709 279 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 ZNF280AP59817 542 aaPredicted RBP11.03□□□□□ -0.64
SHANK2-201ENST00000338508 SH3BP2P78314 561 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 SLC10A2Q12908 348 aaPredicted RBP11.03□□□□□ -0.64
SHANK2-201ENST00000338508 SLC35D2Q76EJ3 337 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 OR5AS1Q8N127 324 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 ZBTB8AQ96BR9 441 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 UTP23Q9BRU9 249 aaKnown RBP11.03□□□□□ -0.64
SHANK2-201ENST00000338508 WDR37Q9Y2I8 494 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 CROCCQ5TZA2 2017 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 SIGLEC6O43699 453 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 NXPH2O95156 264 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 IGHG1P01857 330 aa11.03□□□□□ -0.64
SHANK2-201ENST00000338508 OSMP13725 252 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms