RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 NPIPA1Q9UND3 350 aa15.82■□□□□ 0.12
CHGA-202ENST00000334654 SLC6A5Q9Y345 797 aa15.82■□□□□ 0.12
CHGA-202ENST00000334654 ZNF337Q9Y3M9 751 aa15.82■□□□□ 0.12
CHGA-202ENST00000334654 SMG1Q96Q15 3661 aaKnown RBP15.81■□□□□ 0.12
CHGA-202ENST00000334654 FABP3P05413 133 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 UQCRBP14927 111 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 ZNF17P17021 662 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 TACR3P29371 465 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 EIF1P41567 113 aaKnown RBP15.81■□□□□ 0.12
CHGA-202ENST00000334654 CDH12P55289 794 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 RIPK1Q13546 671 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 LINC00114Q6XXX2 140 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 ZNF605Q86T29 641 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 PRRC1Q96M27 445 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 SLX1AQ9BQ83 275 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 PRSS27Q9BQR3 290 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 CHID1Q9BWS9 393 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 POLR2J2Q9GZM3 115 aaKnown RBP15.81■□□□□ 0.12
CHGA-202ENST00000334654 POLR2J3Q9H1A7 115 aaKnown RBP15.81■□□□□ 0.12
CHGA-202ENST00000334654 TMEM27Q9HBJ8 222 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 MAN2C1Q9NTJ4 1040 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 RIMS3Q9UJD0 308 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 AURKCQ9UQB9 309 aa15.81■□□□□ 0.12
CHGA-202ENST00000334654 TRGV5A0A0B4J1U4 118 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 TRAPPC13A5PLN9 417 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 SUSD5O60279 629 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 ENTPD5O75356 428 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 OR5F1O95221 314 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 RHCEP18577 417 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 CHMP24386 653 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 SLC7A1P30825 629 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 APOBEC1P41238 236 aaKnown RBP15.8■□□□□ 0.12
CHGA-202ENST00000334654 MERTKQ12866 999 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 RAET1LQ5VY80 246 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 ULK3Q6PHR2 472 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 WDR88Q6ZMY6 472 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 GDF7Q7Z4P5 450 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 SLC38A4Q969I6 547 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 DTNBP1Q96EV8 351 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 SLC41A3Q96GZ6 507 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 RSRC1Q96IZ7 334 aaKnown RBP15.8■□□□□ 0.12
CHGA-202ENST00000334654 DHRS1Q96LJ7 313 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 GPR137Q96N19 417 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 PIGQQ9BRB3 760 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 SPRR3Q9UBC9 169 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 RHCGQ9UBD6 479 aa15.8■□□□□ 0.12
CHGA-202ENST00000334654 FAM208BQ5VWN6 2430 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 TMED7-TICAM2A0A0A6YYA0 188 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 TTLL8A6PVC2 850 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 FAM47E-STBD1D6RA91 191 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 HCN1O60741 890 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 FKBP6O75344 327 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 BMP7P18075 431 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 HTR3AP46098 478 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 POLR2HP52434 150 aaKnown RBP15.79■□□□□ 0.12
CHGA-202ENST00000334654 MLLT10P55197 1068 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 HSF1Q00613 529 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 NHSL2Q5HYW2 709 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 ALG10BQ5I7T1 473 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 DCST1Q5T197 706 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 FGD2Q7Z6J4 655 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 C10orf67Q8IYJ2 551 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 OFCC1Q8IZS5 231 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 PIK3C3Q8NEB9 887 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 DNAJA4Q8WW22 397 aaPredicted RBP15.79■□□□□ 0.12
CHGA-202ENST00000334654 SFXN2Q96NB2 322 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 C12orf10Q9HB07 376 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 ARMC1Q9NVT9 282 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 RPS6KB2Q9UBS0 482 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 SLC7A7Q9UM01 511 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 TMED7Q9Y3B3 224 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 NBASA2RRP1 2371 aa15.79■□□□□ 0.12
CHGA-202ENST00000334654 A0A087WUJ7 227 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 TMEM72A0PK05 275 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 H3BNX3 289 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 ZNHIT1O43257 154 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 CHP2O43745 196 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 ITGA2P17301 1181 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 ELK4P28324 431 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 SHC1P29353 583 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 STARP49675 285 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 CLDN15P56746 228 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 TAS2R41P59536 307 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 SOWAHCQ53LP3 525 aaPredicted RBP15.78■□□□□ 0.12
CHGA-202ENST00000334654 KRTCAP3Q53RY4 240 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 SWT1Q5T5J6 900 aaKnown RBP15.78■□□□□ 0.12
CHGA-202ENST00000334654 VASNQ6EMK4 673 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 NKAIN4Q8IVV8 208 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 PYDC1Q8WXC3 89 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 PIP5K1AQ99755 562 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 ZNF426Q9BUY5 554 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 NMNAT1Q9HAN9 279 aaPredicted RBP15.78■□□□□ 0.12
CHGA-202ENST00000334654 RP1L1Q8IWN7 2480 aaPredicted RBP15.78■□□□□ 0.12
CHGA-202ENST00000334654 IGKV1D-42A0A075B6H8 117 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 AQP7O14520 342 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 THRBP10828 461 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 HOXB6P17509 224 aaKnown RBP15.78■□□□□ 0.12
CHGA-202ENST00000334654 LHX2P50458 406 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 RAC1P63000 192 aa15.78■□□□□ 0.12
CHGA-202ENST00000334654 EGR4Q05215 589 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms