RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 CLDN8P56748 225 aa22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 ARHGAP11BQ3KRB8 267 aa22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 TMPPEQ6ZT21 453 aa22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 PIAS4Q8N2W9 510 aaPredicted RBP22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 OR4A15Q8NGL6 344 aa22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 ZNF563Q8TA94 476 aa22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 OR51I1Q9H343 314 aa22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 BARX1Q9HBU1 254 aaPredicted RBP22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 YAE1D1Q9NRH1 226 aa22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 NPAP1Q9NZP6 1156 aa22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 EMC3Q9P0I2 261 aa22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 PCDHGB4Q9UN71 923 aa22.13■■□□□ 1.13
PPP4R4-202ENST00000328839 RAD51DO75771 328 aa22.12■■□□□ 1.13
PPP4R4-202ENST00000328839 CD8AP01732 235 aa22.12■■□□□ 1.13
PPP4R4-202ENST00000328839 COX5AP20674 150 aa22.12■■□□□ 1.13
PPP4R4-202ENST00000328839 DNAJC14Q6Y2X3 702 aaPredicted RBP22.12■■□□□ 1.13
PPP4R4-202ENST00000328839 SLC25A43Q8WUT9 341 aaPredicted RBP22.12■■□□□ 1.13
PPP4R4-202ENST00000328839 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.12■■□□□ 1.13
PPP4R4-202ENST00000328839 REPIN1Q9BWE0 567 aaKnown RBP22.12■■□□□ 1.13
PPP4R4-202ENST00000328839 ZNF350Q9GZX5 532 aa22.12■■□□□ 1.13
PPP4R4-202ENST00000328839 ACER3Q9NUN7 267 aa22.12■■□□□ 1.13
PPP4R4-202ENST00000328839 SPIN1Q9Y657 262 aaPredicted RBP22.12■■□□□ 1.13
PPP4R4-202ENST00000328839 CIB4A0PJX0 185 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 SSX4O60224 188 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 BPGMP07738 259 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 RYKP34925 604 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 EMX2Q04743 252 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 PDCD2Q16342 344 aaPredicted RBP22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 ATAD3BQ5T9A4 648 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 ABLIM2Q6H8Q1 611 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 P2RY8Q86VZ1 359 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 ZNF433Q8N7K0 673 aaPredicted RBP22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 OR52N5Q8NH56 324 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 SPATA3Q8NHX4 192 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 XAGE5Q8WWM1 108 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 ZHX1-C8orf76Q96EF9 292 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 LGALS13Q9UHV8 139 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 POU2F3Q9UKI9 436 aa22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 NOSIPQ9Y314 301 aaKnown RBP22.11■■□□□ 1.13
PPP4R4-202ENST00000328839 OR5H1A6NKK0 313 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 CCT8L1PA6NM43 557 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 RNASET2O00584 256 aaKnown RBP22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 CD5LO43866 347 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 DNAJA2O60884 412 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 OR12D1P0DN82 309 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 CREB1P16220 341 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 CHRNEQ04844 493 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 MAPK14Q16539 360 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 AGAP6Q5VW22 663 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 TNFAIP8L2Q6P589 184 aaPredicted RBP22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 SSX8Q7RTT4 187 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 MTDHQ86UE4 582 aaKnown RBP22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 DTX2Q86UW9 622 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 ANKRD46Q86W74 232 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 RAB8BQ92930 207 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 APH1AQ96BI3 265 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 CTPS2Q9NRF8 586 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 WDR45Q9Y484 360 aa22.1■■□□□ 1.13
PPP4R4-202ENST00000328839 KIAA0513O60268 411 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 CPSF4O95639 269 aaKnown RBP22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 NUDT17P0C025 328 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 APOBEC1P41238 236 aaKnown RBP22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 ZNF83P51522 516 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 NRF1Q16656 503 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 FBXW9Q5XUX1 488 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 HMBOX1Q6NT76 420 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 SLC22A25Q6T423 547 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 TMEM108Q6UXF1 575 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 HMGN2P46Q86SG4 172 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 DPY30Q9C005 99 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 ASIC5Q9NY37 505 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 CHRNA9Q9UGM1 479 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 B3GALT5Q9Y2C3 310 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 SLC35A3Q9Y2D2 325 aa22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 FBN1P35555 2871 aaKnown RBP22.09■■□□□ 1.13
PPP4R4-202ENST00000328839 A0A1W2PR80 420 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 TLX2O43763 284 aaPredicted RBP22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 BCAS1O75363 584 aaPredicted RBP22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 PGM3O95394 542 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 AGR2O95994 175 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 THBS1P07996 1170 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 CCNA2P20248 432 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 PGM1P36871 562 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 NUDT6P53370 316 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 TYW3Q6IPR3 259 aaKnown RBP22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 DNM1P46Q6ZS02 220 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 NUDCD3Q8IVD9 361 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 RADILQ96JH8 1075 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 ARL5BQ96KC2 179 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 PKNOX2Q96KN3 472 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 ADAD1Q96M93 576 aaKnown RBP22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 RHNO1Q9BSD3 238 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 CCDC106Q9BWC9 280 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 CACNG6Q9BXT2 260 aa22.08■■□□□ 1.13
PPP4R4-202ENST00000328839 HEATR1Q9H583 2144 aaKnown RBP22.07■■□□□ 1.12
PPP4R4-202ENST00000328839 IGKV3D-15A0A087WSY6 115 aa22.07■■□□□ 1.12
PPP4R4-202ENST00000328839 WDR91A4D1P6 747 aa22.07■■□□□ 1.12
PPP4R4-202ENST00000328839 ANKRD28O15084 1053 aa22.07■■□□□ 1.12
PPP4R4-202ENST00000328839 HPCAP84074 193 aa22.07■■□□□ 1.12
PPP4R4-202ENST00000328839 SPOCK1Q08629 439 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms