RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ACP2P11117 423 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 TLX1P31314 330 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-201ENST00000317677 HMGA2P52926 109 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 RAB38P57729 211 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 HSF2Q03933 536 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 HEPHL1Q6MZM0 1159 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 TCTN3Q6NUS6 607 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 BHLHB9Q6PI77 547 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 METAP1DQ6UB28 335 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-201ENST00000317677 TRILQ7L0X0 811 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 SAMD14Q8IZD0 417 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-201ENST00000317677 SLC16A11Q8NCK7 471 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 OR9Q2Q8NGE9 314 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 BBS10Q8TAM1 723 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 RIT1Q92963 219 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 ZNF354BQ96LW1 612 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 FEVQ99581 238 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 ACTRT3Q9BYD9 372 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 RBCK1Q9BYM8 510 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 RDH8Q9NYR8 311 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 CNOT2Q9NZN8 540 aaKnown RBP12.08□□□□□ -0.48
CPNE1-201ENST00000317677 KIF17Q9P2E2 1029 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 LRIT1Q9P2V4 623 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 SEC14L4Q9UDX3 406 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 TMEM184BQ9Y519 407 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-201ENST00000317677 DSPPQ9NZW4 1301 aa12.08□□□□□ -0.48
CPNE1-201ENST00000317677 IGHV1OR21-1A0A087WYE8 117 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 MFSD2BA6NFX1 497 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 TLCD2A6NGC4 264 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 H3BMH7 237 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 M0R3H8 397 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 SNAPINO95295 136 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 GPR75O95800 540 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 IFNW1P05000 195 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 ATP1B1P05026 303 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 GABRB1P18505 474 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 RHCEP18577 417 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 CSF2RBP32927 897 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 CRISP3P54108 245 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 MAT1AQ00266 395 aaKnown RBP12.07□□□□□ -0.48
CPNE1-201ENST00000317677 ST3GAL4Q11206 333 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 TSC22D1Q15714 1073 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 SSX1Q16384 188 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 TSTQ16762 297 aaKnown RBP12.07□□□□□ -0.48
CPNE1-201ENST00000317677 PRICKLE4Q2TBC4 344 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 HSD17B12Q53GQ0 312 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 LRFN4Q6PJG9 635 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 KLHL17Q6TDP4 642 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 Q6ZPB1 254 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-201ENST00000317677 ATG16L2Q8NAA4 619 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 SUMF1Q8NBK3 374 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 OR10G2Q8NGC3 310 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 HGDQ93099 445 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 MS4A4EQ96PG1 132 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 RBP7Q96R05 134 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 ZNF607Q96SK3 696 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 DPYSL5Q9BPU6 564 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 NIPSNAP1Q9BPW8 284 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 CNPPD1Q9BV87 410 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 RAB33BQ9H082 229 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 ABCB9Q9NP78 766 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 HCN3Q9P1Z3 774 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 SEC14L3Q9UDX4 400 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 EPHA6Q9UF33 1036 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 ADAM30Q9UKF2 790 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 CLDN16Q9Y5I7 305 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 GPR179Q6PRD1 2367 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 CABIN1Q9Y6J0 2220 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 FAM240BA0A1B0GVZ2 78 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 CHP2O43745 196 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 FCMRO60667 390 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 SRPX2O60687 465 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-201ENST00000317677 IL1AP01583 271 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 SCG5P05408 212 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 TSPAN19P0C672 248 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 PDX1P52945 283 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 EPHA4P54764 986 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 DUSP8Q13202 625 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 KCNAB1Q14722 419 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 SF3A2Q15428 464 aaKnown RBP12.07□□□□□ -0.48
CPNE1-201ENST00000317677 DUSP5Q16690 384 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 FLYWCH1Q4VC44 716 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 CDC73Q6P1J9 531 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 KANSL1Q7Z3B3 1105 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 TMEM151BQ8IW70 566 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 LILRB2Q8N423 598 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 LRRC17Q8N6Y2 441 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 C19orf18Q8NEA5 215 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 OR8K3Q8NH51 312 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 CDS1Q92903 461 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 SLC25A46Q96AG3 418 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 KCNJ15Q99712 375 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 SPRTNQ9H040 489 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-201ENST00000317677 FSCN3Q9NQT6 498 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 C19orf53Q9UNZ5 99 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-201ENST00000317677 MAB21L2Q9Y586 359 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 CDH10Q9Y6N8 788 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 SESN1Q9Y6P5 492 aa12.07□□□□□ -0.48
CPNE1-201ENST00000317677 RP1P56715 2156 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 WDR87Q6ZQQ6 2873 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms